Project name: 4bcx [mutate: LE739A, CS713A]

Status: done

Started: 2024-06-25 14:56:22
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Chain sequence(s) A: PIPDLKVFEREGVQLNLSFIRPPENPALLLITITATNFSEGDVTHFICQAAVPKSLQLQLQAPSGNTVPARGGLPITQLFRILNPNKAPLRLKLRLTYDHFHQSVQEIFEVNNLPVESWQ
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues LE739A,CS713A
Energy difference between WT (input) and mutated protein (by FoldX) 0.603833 kcal/mol
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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:24)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:30)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:53)
Show buried residues

Minimal score value
-3.3437
Maximal score value
0.6467
Average score
-1.0345
Total score value
-124.1431

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
666 P A -0.4099
667 I A -0.3459
668 P A -0.9296
669 D A -1.9253
670 L A -1.7514
671 K A -2.2982
672 V A -1.6301
673 F A 0.0000
674 E A -3.3025
675 R A -3.3437
676 E A -3.0449
677 G A -2.0589
678 V A 0.0000
679 Q A -1.8204
680 L A 0.0000
681 N A -1.5143
682 L A 0.0000
683 S A -0.5473
684 F A 0.0000
685 I A 0.6467
686 R A -1.0098
687 P A -1.0606
688 P A -1.5372
689 E A -2.4891
690 N A -1.9578
691 P A -1.6878
692 A A -1.3930
693 L A 0.0000
694 L A 0.0000
695 L A 0.2976
696 I A 0.0000
697 T A -0.1035
698 I A 0.0000
699 T A -0.5848
700 A A 0.0000
701 T A -0.8930
702 N A 0.0000
703 F A -0.8217
704 S A -1.9136
705 E A -2.6783
706 G A -2.1435
707 D A -2.4754
708 V A 0.0000
709 T A -1.2741
710 H A -1.1632
711 F A 0.0000
712 I A -0.0071
713 S A 0.0000 mutated: CS713A
714 Q A -0.7411
715 A A -0.7355
716 A A -1.1755
717 V A -1.2341
718 P A -1.5730
719 K A -1.9778
720 S A -1.7111
721 L A 0.0000
722 Q A -1.7420
723 L A -0.9863
724 Q A -1.2811
725 L A -0.3093
726 Q A -0.9031
727 A A -0.3910
728 P A -0.2679
729 S A -0.5753
730 G A -0.6441
731 N A -0.9384
732 T A -1.2889
733 V A 0.0000
734 P A -1.9622
735 A A -2.3621
736 R A -2.6653
737 G A -1.8450
738 G A -1.8648
739 E A -2.2897 mutated: LE739A
740 P A -1.3216
741 I A 0.0000
742 T A -0.5414
743 Q A 0.0000
744 L A -0.1111
745 F A 0.0000
746 R A -1.1008
747 I A 0.0000
748 L A -0.9099
749 N A 0.0000
750 P A -1.6913
751 N A -2.3429
752 K A -2.7681
753 A A -2.0055
754 P A -1.3528
755 L A 0.0000
756 R A -2.5392
757 L A 0.0000
758 K A -1.8975
759 L A 0.0000
760 R A -1.1121
761 L A 0.0000
762 T A -0.8087
763 Y A 0.0000
764 D A -1.6131
765 H A 0.0000
766 F A -0.7481
767 H A -1.5284
768 Q A -1.7387
769 S A -1.4521
770 V A 0.0000
771 Q A -1.5672
772 E A -0.9800
773 I A 0.0322
774 F A -0.3647
775 E A -2.0187
776 V A 0.0000
777 N A -2.4540
778 N A -1.9146
779 L A -1.3206
780 P A -0.6428
781 V A 0.0286
782 E A -1.0815
783 S A 0.0000
784 W A -1.5627
785 Q A -2.0776
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Laboratory of Theory of Biopolymers 2018