| Chain sequence(s) |
F: IGKEFKRIVQRIKDFLRNLVPRTES
input PDB |
| Selected Chain(s) | F |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with F chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 13 | I | F | 1.2080 | |
| 14 | G | F | -0.6986 | |
| 15 | K | F | -2.5956 | |
| 16 | E | F | -2.3411 | |
| 17 | F | F | -0.4221 | |
| 18 | K | F | -2.4402 | |
| 19 | R | F | -2.8093 | |
| 20 | I | F | -0.8126 | |
| 21 | V | F | -1.0762 | |
| 22 | Q | F | -2.3837 | |
| 23 | R | F | -2.0630 | |
| 24 | I | F | -0.2327 | |
| 25 | K | F | -1.5841 | |
| 26 | D | F | -2.0899 | |
| 27 | F | F | 0.5855 | |
| 28 | L | F | 0.8431 | |
| 29 | R | F | -1.0723 | |
| 30 | N | F | -0.4371 | |
| 31 | L | F | 1.4256 | |
| 32 | V | F | 1.3760 | |
| 33 | P | F | -0.5140 | |
| 34 | R | F | -1.8864 | |
| 35 | T | F | -1.5388 | |
| 36 | E | F | -2.1181 |