| Chain sequence(s) |
H: QVQLQDSGGGLVQAGGSLRLSCEASGSIFSISAMGWYRQAPGKQRELVAVITTDGSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTDVYYCGASPRALKWYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:32)
[INFO] Main: Simulation completed successfully. (00:01:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.6183 | |
| 2 | V | H | -1.0912 | |
| 3 | Q | H | -1.8807 | |
| 4 | L | H | -1.7808 | |
| 5 | Q | H | -2.3594 | |
| 6 | D | H | -1.7524 | |
| 7 | S | H | -1.5019 | |
| 9 | G | H | -1.3072 | |
| 10 | G | H | -0.8913 | |
| 11 | G | H | 0.1265 | |
| 12 | L | H | 1.0909 | |
| 13 | V | H | 0.0998 | |
| 14 | Q | H | -1.2271 | |
| 15 | A | H | -1.3992 | |
| 16 | G | H | -1.4056 | |
| 17 | G | H | -0.9857 | |
| 18 | S | H | -1.3906 | |
| 19 | L | H | -1.1335 | |
| 20 | R | H | -2.3696 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -1.3414 | |
| 23 | C | H | 0.0000 | |
| 24 | E | H | -2.5438 | |
| 25 | A | H | -1.6798 | |
| 26 | S | H | -1.3929 | |
| 27 | G | H | -0.7684 | |
| 29 | S | H | -0.1365 | |
| 30 | I | H | 0.8626 | |
| 31 | F | H | 2.0318 | |
| 32 | S | H | 0.7368 | |
| 33 | I | H | 0.2139 | |
| 39 | S | H | -0.4380 | |
| 40 | A | H | 0.0000 | |
| 41 | M | H | 0.0000 | |
| 42 | G | H | 0.0000 | |
| 43 | W | H | 0.0000 | |
| 44 | Y | H | -0.1289 | |
| 45 | R | H | 0.0000 | |
| 46 | Q | H | -1.8011 | |
| 47 | A | H | -1.6469 | |
| 48 | P | H | -1.2166 | |
| 49 | G | H | -1.7259 | |
| 50 | K | H | -3.0028 | |
| 51 | Q | H | -2.7926 | |
| 52 | R | H | -2.0195 | |
| 53 | E | H | -1.7297 | |
| 54 | L | H | -0.1942 | |
| 55 | V | H | 0.0000 | |
| 56 | A | H | 0.0000 | |
| 57 | V | H | -0.2874 | |
| 58 | I | H | 0.0000 | |
| 59 | T | H | -1.2368 | |
| 60 | T | H | -1.2505 | |
| 65 | D | H | -2.0685 | |
| 66 | G | H | -1.5281 | |
| 67 | S | H | -1.1289 | |
| 68 | T | H | -0.9564 | |
| 69 | N | H | -1.4769 | |
| 70 | Y | H | -1.1515 | |
| 71 | A | H | -1.4294 | |
| 72 | D | H | -2.5566 | |
| 73 | S | H | -1.8012 | |
| 74 | V | H | 0.0000 | |
| 75 | K | H | -2.7581 | |
| 76 | G | H | -1.8727 | |
| 77 | R | H | -1.7435 | |
| 78 | F | H | 0.0000 | |
| 79 | T | H | -1.2179 | |
| 80 | I | H | 0.0000 | |
| 81 | S | H | -0.7153 | |
| 82 | R | H | -1.4323 | |
| 83 | D | H | -2.1019 | |
| 84 | N | H | -2.2965 | |
| 85 | A | H | -1.5916 | |
| 86 | K | H | -2.3775 | |
| 87 | N | H | -2.0848 | |
| 88 | T | H | 0.0000 | |
| 89 | V | H | 0.0000 | |
| 90 | Y | H | -0.8602 | |
| 91 | L | H | 0.0000 | |
| 92 | Q | H | -1.8170 | |
| 93 | M | H | 0.0000 | |
| 94 | N | H | -2.1770 | |
| 95 | S | H | -1.4603 | |
| 96 | L | H | 0.0000 | |
| 97 | K | H | -2.1437 | |
| 98 | P | H | -1.7911 | |
| 99 | E | H | -2.2431 | |
| 100 | D | H | 0.0000 | |
| 101 | T | H | -0.8655 | |
| 102 | D | H | 0.0000 | |
| 103 | V | H | -0.5326 | |
| 104 | Y | H | 0.0000 | |
| 105 | Y | H | -0.3219 | |
| 106 | C | H | 0.0000 | |
| 107 | G | H | 0.0000 | |
| 108 | A | H | 0.0000 | |
| 109 | S | H | 0.0000 | |
| 110 | P | H | -0.6082 | |
| 111 | R | H | -1.5666 | |
| 112 | A | H | -0.5396 | |
| 135 | L | H | 0.3993 | |
| 136 | K | H | -0.7738 | |
| 137 | W | H | 0.2244 | |
| 138 | Y | H | 0.3458 | |
| 139 | W | H | 0.1107 | |
| 140 | G | H | -0.9628 | |
| 141 | Q | H | -1.3675 | |
| 142 | G | H | -1.0881 | |
| 143 | T | H | -1.0661 | |
| 144 | Q | H | -1.1030 | |
| 145 | V | H | 0.0000 | |
| 146 | T | H | -0.2874 | |
| 147 | V | H | 0.0000 | |
| 148 | S | H | -0.6178 | |
| 149 | S | H | -0.8353 |