| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVDGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCGGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPEGHPLPDAPPPSPLYVPPPPSSPYAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQVSTPAQNVYNPANFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9491 | |
| 2 | L | A | 1.9735 | |
| 3 | P | A | 0.6556 | |
| 4 | P | A | 0.3529 | |
| 5 | T | A | 0.1095 | |
| 6 | T | A | 0.1293 | |
| 7 | P | A | 0.1604 | |
| 8 | V | A | 1.2137 | |
| 9 | A | A | 0.0235 | |
| 10 | K | A | -1.1572 | |
| 11 | V | A | -0.4139 | |
| 12 | Q | A | -1.5432 | |
| 13 | S | A | -1.6121 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4261 | |
| 16 | E | A | -2.4436 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4569 | |
| 20 | P | A | 0.1072 | |
| 21 | T | A | 0.1174 | |
| 22 | S | A | -0.1677 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0920 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1305 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.5692 | |
| 31 | R | A | -2.5056 | |
| 32 | L | A | -0.6830 | |
| 33 | L | A | 1.2637 | |
| 34 | T | A | 1.4660 | |
| 35 | V | A | 1.9930 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2416 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6360 | |
| 40 | K | A | -1.8882 | |
| 41 | D | A | -0.7940 | |
| 42 | I | A | 1.2463 | |
| 43 | V | A | 2.1333 | |
| 44 | V | A | 1.4789 | |
| 45 | D | A | -1.0006 | |
| 46 | G | A | -0.5960 | |
| 47 | K | A | -0.2652 | |
| 48 | V | A | 2.1387 | |
| 49 | L | A | 2.4835 | |
| 50 | V | A | 1.4736 | |
| 51 | P | A | 0.3457 | |
| 52 | K | A | -0.6990 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1242 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4723 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2747 | |
| 70 | K | A | -1.8168 | |
| 71 | F | A | -0.6741 | |
| 72 | A | A | -0.5792 | |
| 73 | L | A | -0.8655 | |
| 74 | P | A | -1.2624 | |
| 75 | Q | A | -2.4812 | |
| 76 | K | A | -3.0944 | |
| 77 | D | A | -2.9882 | |
| 78 | F | A | -1.6311 | |
| 79 | Y | A | -1.9208 | |
| 80 | D | A | -2.7644 | |
| 81 | P | A | -2.3569 | |
| 82 | E | A | -3.0734 | |
| 83 | K | A | -3.4444 | |
| 84 | E | A | -2.5096 | |
| 85 | R | A | -1.3173 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6252 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9707 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3123 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7292 | |
| 99 | G | A | -0.5298 | |
| 100 | P | A | -0.4307 | |
| 101 | L | A | -0.0117 | |
| 102 | G | A | -0.3281 | |
| 103 | K | A | -0.8467 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4850 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1529 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4155 | |
| 110 | L | A | 0.2666 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0944 | |
| 113 | K | A | -0.4517 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -0.8926 | |
| 116 | D | A | -1.4787 | |
| 117 | T | A | -1.2637 | |
| 118 | E | A | -2.7485 | |
| 119 | N | A | -2.4432 | |
| 120 | P | A | -1.5200 | |
| 121 | T | A | -0.7346 | |
| 122 | A | A | -0.2626 | |
| 123 | P | A | 0.1248 | |
| 124 | V | A | -0.0927 | |
| 125 | H | A | -1.1874 | |
| 126 | E | A | -2.2041 | |
| 127 | G | A | -2.0660 | |
| 128 | A | A | -1.5375 | |
| 129 | D | A | -2.4317 | |
| 130 | D | A | -2.0881 | |
| 131 | R | A | -1.1446 | |
| 132 | V | A | 0.2060 | |
| 133 | A | A | 0.4373 | |
| 134 | F | A | 0.2748 | |
| 135 | S | A | -0.0668 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7145 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5597 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2349 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1188 | |
| 157 | D | A | 0.3150 | |
| 158 | L | A | 0.8498 | |
| 159 | A | A | 0.2165 | |
| 160 | E | A | -1.4898 | |
| 161 | P | A | -0.3814 | |
| 162 | C | A | 0.0620 | |
| 163 | G | A | -0.4729 | |
| 164 | G | A | -0.4364 | |
| 165 | L | A | 0.4115 | |
| 166 | P | A | -0.1574 | |
| 167 | P | A | -0.3486 | |
| 168 | G | A | -0.4248 | |
| 169 | A | A | -0.0734 | |
| 170 | C | A | 0.6773 | |
| 171 | P | A | 0.4805 | |
| 172 | P | A | 0.7950 | |
| 173 | I | A | 1.9917 | |
| 174 | Q | A | 0.8399 | |
| 175 | L | A | 1.4643 | |
| 176 | V | A | 0.8385 | |
| 177 | N | A | -0.3183 | |
| 178 | S | A | 0.0321 | |
| 179 | V | A | 0.4349 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3722 | |
| 182 | D | A | 0.0759 | |
| 183 | G | A | -0.1651 | |
| 184 | D | A | -0.5768 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1470 | |
| 190 | F | A | 0.0489 | |
| 191 | G | A | -0.1092 | |
| 192 | N | A | -0.2944 | |
| 193 | M | A | -0.1648 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4410 | |
| 197 | E | A | -2.6405 | |
| 198 | L | A | -1.2418 | |
| 199 | Q | A | -2.5546 | |
| 200 | Q | A | -3.3479 | |
| 201 | D | A | -3.6067 | |
| 202 | R | A | -3.3485 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2183 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3769 | |
| 211 | S | A | -1.9225 | |
| 212 | T | A | -1.4968 | |
| 213 | R | A | -2.2120 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1781 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3334 | |
| 220 | L | A | 0.5308 | |
| 221 | K | A | -1.2507 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8736 | |
| 224 | N | A | -1.6424 | |
| 225 | E | A | -1.3124 | |
| 226 | A | A | -0.6769 | |
| 227 | Y | A | -0.4062 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6943 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0974 | |
| 234 | F | A | 0.2866 | |
| 235 | G | A | -0.7652 | |
| 236 | R | A | -2.4951 | |
| 237 | R | A | -2.6431 | |
| 238 | E | A | -1.9327 | |
| 239 | Q | A | -0.0132 | |
| 240 | V | A | 1.5670 | |
| 241 | Y | A | 1.2508 | |
| 242 | A | A | 0.1420 | |
| 243 | R | A | -1.3609 | |
| 244 | H | A | -1.2594 | |
| 245 | F | A | -0.3425 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5509 | |
| 249 | C | A | -1.2277 | |
| 250 | G | A | -1.0614 | |
| 251 | P | A | -1.0599 | |
| 252 | E | A | -1.3242 | |
| 253 | G | A | -1.2644 | |
| 254 | H | A | -1.4553 | |
| 255 | P | A | -1.3619 | |
| 256 | L | A | -0.4369 | |
| 257 | P | A | -0.9233 | |
| 258 | D | A | -1.5843 | |
| 259 | A | A | -0.4481 | |
| 260 | P | A | -0.7354 | |
| 261 | P | A | -0.2595 | |
| 262 | P | A | 0.0060 | |
| 263 | S | A | 0.2076 | |
| 264 | P | A | 0.6653 | |
| 265 | L | A | 1.6541 | |
| 266 | Y | A | 1.4602 | |
| 267 | V | A | 1.7155 | |
| 268 | P | A | 0.5229 | |
| 269 | P | A | 0.4301 | |
| 270 | P | A | -0.1824 | |
| 271 | P | A | -0.1539 | |
| 272 | S | A | -0.3236 | |
| 273 | S | A | 0.2229 | |
| 274 | P | A | 0.3872 | |
| 275 | Y | A | 1.1555 | |
| 276 | A | A | 0.8784 | |
| 277 | V | A | 1.3333 | |
| 278 | R | A | 0.1899 | |
| 279 | P | A | -0.3125 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.4321 | |
| 282 | D | A | -0.7498 | |
| 283 | Y | A | 0.9307 | |
| 284 | F | A | 0.7094 | |
| 285 | G | A | 0.0842 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8292 | |
| 291 | L | A | 1.6071 | |
| 292 | V | A | 0.5933 | |
| 293 | S | A | -0.1565 | |
| 294 | S | A | -0.9671 | |
| 295 | D | A | -1.8420 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0988 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6571 | |
| 301 | R | A | -1.9229 | |
| 302 | P | A | -0.9835 | |
| 303 | F | A | -0.1657 | |
| 304 | W | A | -0.5137 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0801 | |
| 307 | R | A | -2.8302 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.3780 | |
| 310 | G | A | -1.2235 | |
| 311 | N | A | -1.3167 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9138 | |
| 319 | N | A | -0.9980 | |
| 320 | E | A | -1.0533 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3841 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2105 | |
| 333 | N | A | 0.4138 | |
| 334 | F | A | 1.5093 | |
| 335 | T | A | 0.8069 | |
| 336 | I | A | 0.3904 | |
| 337 | S | A | -1.1122 | |
| 338 | Q | A | -1.9928 | |
| 339 | Q | A | -1.9039 | |
| 340 | V | A | -0.0350 | |
| 341 | S | A | -0.2730 | |
| 342 | T | A | -0.4208 | |
| 343 | P | A | -0.7854 | |
| 344 | A | A | -0.7108 | |
| 345 | Q | A | -1.3228 | |
| 346 | N | A | -0.7911 | |
| 347 | V | A | 1.1844 | |
| 348 | Y | A | 1.2358 | |
| 349 | N | A | -0.1979 | |
| 350 | P | A | -0.5674 | |
| 351 | A | A | -0.3495 | |
| 352 | N | A | -0.5474 | |
| 353 | F | A | -1.1816 | |
| 354 | K | A | -2.3300 | |
| 355 | N | A | -1.8907 | |
| 356 | Y | A | -0.0296 | |
| 357 | L | A | 0.6733 | |
| 358 | R | A | 0.9515 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4857 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0087 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8374 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6351 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2822 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3242 | |
| 376 | L | A | -1.7538 | |
| 377 | D | A | -2.0313 | |
| 378 | P | A | -1.0618 | |
| 379 | G | A | -1.0213 | |
| 380 | V | A | -0.9292 | |
| 381 | L | A | -0.5457 | |
| 382 | A | A | -0.6638 | |
| 383 | H | A | -0.8505 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4169 | |
| 386 | T | A | -0.5841 | |
| 387 | M | A | -0.3381 | |
| 388 | N | A | -0.8768 | |
| 389 | P | A | -1.2748 | |
| 390 | T | A | -1.5576 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5638 | |
| 393 | E | A | -2.9554 | |
| 394 | N | A | -2.7101 | |
| 395 | W | A | -1.5918 | |
| 396 | N | A | -1.3422 | |
| 397 | L | A | -0.2881 | |
| 398 | G | A | 0.4811 | |
| 399 | F | A | 2.3853 | |
| 400 | V | A | 1.8066 | |
| 401 | P | A | 0.0281 | |
| 402 | P | A | -1.9176 | |
| 403 | K | A | -3.4259 | |
| 404 | E | A | -3.9135 | |
| 405 | R | A | -4.2433 | |
| 406 | E | A | -3.9161 | |
| 407 | D | A | -2.9207 | |
| 408 | P | A | -1.7865 | |
| 409 | Y | A | -0.9845 | |
| 410 | K | A | -2.0967 | |
| 411 | G | A | -0.6374 | |
| 412 | L | A | 0.6659 | |
| 413 | I | A | 1.5833 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3941 | |
| 416 | E | A | -1.6578 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8647 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9416 | |
| 421 | E | A | -2.5791 | |
| 422 | R | A | -2.2074 | |
| 423 | F | A | -1.0995 | |
| 424 | S | A | -1.3628 | |
| 425 | Q | A | -1.8689 | |
| 426 | D | A | -2.8902 | |
| 427 | L | A | -1.9822 | |
| 428 | D | A | -2.7752 | |
| 429 | Q | A | -2.6075 | |
| 430 | F | A | -1.4255 | |
| 431 | A | A | -0.8780 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5160 | |
| 435 | K | A | -0.6831 | |
| 436 | F | A | 0.1845 | |
| 437 | L | A | 1.0540 | |
| 438 | Y | A | 0.8469 | |
| 439 | Q | A | -0.2546 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine