| Chain sequence(s) |
A: GGGCGETCVGGTCNTPGCTCSWPVCTRNGLPVT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:04)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1561 | |
| 2 | G | A | -0.4116 | |
| 3 | G | A | -0.3740 | |
| 4 | C | A | -0.3090 | |
| 5 | G | A | -0.6197 | |
| 6 | E | A | -0.3373 | |
| 7 | T | A | 0.7149 | |
| 8 | C | A | 0.0000 | |
| 9 | V | A | 1.9280 | |
| 10 | G | A | 0.2968 | |
| 11 | G | A | 0.1074 | |
| 12 | T | A | -0.0063 | |
| 13 | C | A | -0.2661 | |
| 14 | N | A | -1.4386 | |
| 15 | T | A | -0.8780 | |
| 16 | P | A | -0.7658 | |
| 17 | G | A | -0.4150 | |
| 18 | C | A | -0.6285 | |
| 19 | T | A | -0.3050 | |
| 20 | C | A | 0.6711 | |
| 21 | S | A | 1.1124 | |
| 22 | W | A | 1.9734 | |
| 23 | P | A | 1.8365 | |
| 24 | V | A | 2.0006 | |
| 25 | C | A | 0.0000 | |
| 26 | T | A | -0.2062 | |
| 27 | R | A | -0.7849 | |
| 28 | N | A | -1.2367 | |
| 29 | G | A | -0.5534 | |
| 30 | L | A | 0.4548 | |
| 31 | P | A | 0.5870 | |
| 32 | V | A | 1.3081 | |
| 33 | T | A | 0.5687 |