Project name: 6dbb30f96558d2d

Status: done

Started: 2026-02-23 13:59:55
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Chain sequence(s) A: FEFEFEGKGH
C: FEFEFEGKGH
B: FEFEFEGKGH
E: FEFEFEGKGH
D: FEFEFEGKGH
G: FEFEFEGKGH
F: FEFEFEGKGH
H: FEFEFEGKGH
input PDB
Selected Chain(s) A,C,B,E,D,G,F,H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:27)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:29)
Show buried residues

Minimal score value
-3.8018
Maximal score value
0.7115
Average score
-1.9388
Total score value
-155.101

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A -0.5517
2 E A -2.4606
3 F A -2.4358
4 E A -3.3316
5 F A -2.5671
6 E A -3.4202
7 G A 0.0000
8 K A -2.8496
9 G A 0.0000
10 H A -1.7461
1 F B -0.0668
2 E B -2.0368
3 F B -1.8056
4 E B -2.8261
5 F B -1.5288
6 E B -3.1044
7 G B -2.1184
8 K B -3.1187
9 G B -1.7966
10 H B -1.8390
1 F C 0.1064
2 E C -1.9714
3 F C -1.7995
4 E C -2.9356
5 F C -1.6473
6 E C -3.2281
7 G C -2.2970
8 K C -3.2794
9 G C -1.9170
10 H C -1.9372
1 F D -0.7445
2 E D -2.5302
3 F D -2.5497
4 E D -3.5264
5 F D -2.6173
6 E D -3.5437
7 G D 0.0000
8 K D -2.9640
9 G D 0.0000
10 H D -1.7444
1 F E 0.1493
2 E E -1.5444
3 F E 0.0000
4 E E -3.2561
5 F E -2.4953
6 E E -3.3215
7 G E 0.0000
8 K E -3.3389
9 G E 0.0000
10 H E -2.1725
1 F F -0.0902
2 E F -2.2651
3 F F -1.9508
4 E F -3.0157
5 F F -1.6527
6 E F -3.1590
7 G F -2.2419
8 K F -3.0579
9 G F -1.5242
10 H F -1.3461
1 F G -0.2040
2 E G -1.5138
3 F G -1.8791
4 E G -3.0700
5 F G -2.5543
6 E G -3.8018
7 G G 0.0000
8 K G -3.5112
9 G G 0.0000
10 H G -1.9101
1 F H 0.7115
2 E H -1.9543
3 F H -1.7958
4 E H -3.1209
5 F H -1.7766
6 E H -3.3650
7 G H -2.2780
8 K H -2.9930
9 G H -1.5773
10 H H -1.4941
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Laboratory of Theory of Biopolymers 2018