| Chain sequence(s) |
A: YVDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCELDVTCNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFPCGRVSVSQTSKLTRAETVFPDVDYVNSTEAETILDNITQSTQSFNDFTR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:00)
[INFO] Main: Simulation completed successfully. (00:02:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9158 | |
| 2 | V | A | 1.5733 | |
| 3 | D | A | -0.3980 | |
| 4 | G | A | -1.7656 | |
| 5 | D | A | -3.6631 | |
| 6 | Q | A | -3.5210 | |
| 7 | C | A | -3.3095 | |
| 8 | E | A | -3.2981 | |
| 9 | S | A | -2.0979 | |
| 10 | N | A | -2.2162 | |
| 11 | P | A | -1.1739 | |
| 12 | C | A | -0.6310 | |
| 13 | L | A | 0.0901 | |
| 14 | N | A | -0.7117 | |
| 15 | G | A | -0.4063 | |
| 16 | G | A | -0.2105 | |
| 17 | S | A | -0.5450 | |
| 18 | C | A | -1.5883 | |
| 19 | K | A | -2.8137 | |
| 20 | D | A | -3.9784 | |
| 21 | D | A | -2.9718 | |
| 22 | I | A | -0.3473 | |
| 23 | N | A | -1.5254 | |
| 24 | S | A | -1.9651 | |
| 25 | Y | A | -2.3649 | |
| 26 | E | A | -2.6403 | |
| 27 | C | A | -1.2243 | |
| 28 | W | A | 0.5451 | |
| 29 | C | A | 0.3439 | |
| 30 | P | A | 0.8926 | |
| 31 | F | A | 1.8937 | |
| 32 | G | A | 0.0000 | |
| 33 | F | A | -0.0281 | |
| 34 | E | A | -1.4313 | |
| 35 | G | A | -1.4999 | |
| 36 | K | A | -2.1832 | |
| 37 | N | A | -1.4031 | |
| 38 | C | A | 0.0000 | |
| 39 | E | A | -0.8944 | |
| 40 | L | A | -0.1636 | |
| 41 | D | A | -0.9914 | |
| 42 | V | A | -0.6519 | |
| 43 | T | A | -1.3667 | |
| 44 | C | A | -1.7335 | |
| 45 | N | A | -2.0083 | |
| 46 | I | A | -1.1750 | |
| 47 | K | A | -2.8022 | |
| 48 | N | A | -2.4520 | |
| 49 | G | A | 0.0000 | |
| 50 | R | A | -3.0619 | |
| 51 | C | A | 0.0000 | |
| 52 | E | A | -2.6657 | |
| 53 | Q | A | -0.7535 | |
| 54 | F | A | 0.3174 | |
| 55 | C | A | -1.1551 | |
| 56 | K | A | -2.0678 | |
| 57 | N | A | -2.8805 | |
| 58 | S | A | -2.2978 | |
| 59 | A | A | -2.0168 | |
| 60 | D | A | -3.1268 | |
| 61 | N | A | -3.4559 | |
| 62 | K | A | -3.1693 | |
| 63 | V | A | -1.9015 | |
| 64 | V | A | -0.4571 | |
| 65 | C | A | 0.0000 | |
| 66 | S | A | -0.3720 | |
| 67 | C | A | -0.7533 | |
| 68 | T | A | -0.8680 | |
| 69 | E | A | -1.9613 | |
| 70 | G | A | -0.9409 | |
| 71 | Y | A | -0.7058 | |
| 72 | R | A | -1.8498 | |
| 73 | L | A | -1.9501 | |
| 74 | A | A | -2.2719 | |
| 75 | E | A | -3.1600 | |
| 76 | N | A | -2.8914 | |
| 77 | Q | A | -3.0397 | |
| 78 | K | A | -2.6001 | |
| 79 | S | A | -2.3949 | |
| 80 | C | A | -1.7636 | |
| 81 | E | A | -1.3940 | |
| 82 | P | A | -0.1556 | |
| 83 | A | A | 0.1854 | |
| 84 | V | A | 1.8627 | |
| 85 | P | A | 1.3910 | |
| 86 | F | A | 2.3472 | |
| 87 | P | A | 0.8082 | |
| 88 | C | A | 0.6773 | |
| 89 | G | A | -0.3065 | |
| 90 | R | A | -0.8731 | |
| 91 | V | A | 1.2455 | |
| 92 | S | A | 0.6883 | |
| 93 | V | A | 1.5004 | |
| 94 | S | A | 0.2257 | |
| 95 | Q | A | -1.0986 | |
| 96 | T | A | -0.8142 | |
| 97 | S | A | -1.0432 | |
| 98 | K | A | -1.4425 | |
| 99 | L | A | 0.1463 | |
| 100 | T | A | -0.9425 | |
| 101 | R | A | -2.1610 | |
| 102 | A | A | -1.3292 | |
| 103 | E | A | -1.5848 | |
| 104 | T | A | 0.1860 | |
| 105 | V | A | 1.8840 | |
| 106 | F | A | 2.3093 | |
| 107 | P | A | 0.4789 | |
| 108 | D | A | -0.6625 | |
| 109 | V | A | 0.8581 | |
| 110 | D | A | -0.5064 | |
| 111 | Y | A | 1.1030 | |
| 112 | V | A | 1.2444 | |
| 113 | N | A | -0.7968 | |
| 114 | S | A | -1.1205 | |
| 115 | T | A | -1.4774 | |
| 116 | E | A | -1.8342 | |
| 117 | A | A | -0.9874 | |
| 118 | E | A | -1.9065 | |
| 119 | T | A | -0.7612 | |
| 120 | I | A | 1.1712 | |
| 121 | L | A | 0.8042 | |
| 122 | D | A | -1.3242 | |
| 123 | N | A | -0.8918 | |
| 124 | I | A | 0.9176 | |
| 125 | T | A | -0.5416 | |
| 126 | Q | A | -1.6202 | |
| 127 | S | A | -0.8186 | |
| 128 | T | A | -0.7065 | |
| 129 | Q | A | -1.4446 | |
| 130 | S | A | -0.5946 | |
| 131 | F | A | 0.5698 | |
| 132 | N | A | -1.4106 | |
| 133 | D | A | -1.7037 | |
| 134 | F | A | 0.5719 | |
| 135 | T | A | -0.5617 | |
| 136 | R | A | -1.8799 |