| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLKLSCAASGFTFSTYAMNWVRQAPGKGLEWVGRIRSKYNNYATYYADSVKDRFTISRDDSKNTLYLQMNSLRAEDTAVYYCVRHGNFGNSYVSWFAYWGQGTLVTVSSGGGGSGGGGSGGGGSQTVVTQEPSLTVSPGGTVTLTCRSSTGAVTTSNYANWVQQKPGQAPRGLIGGTNKRAPWTPARFSGSLLGGKAALTLSGVQPEDEAEYYCALWYSNLWVFGGGTKLTVL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 10 | E | A | -2.0074 | |
| 11 | V | A | -1.4271 | |
| 12 | Q | A | -1.1935 | |
| 13 | L | A | 0.0000 | |
| 14 | V | A | 0.9919 | |
| 15 | E | A | 0.0000 | |
| 16 | S | A | -0.2561 | |
| 17 | G | A | -0.8396 | |
| 18 | G | A | -0.3605 | |
| 19 | G | A | 0.5583 | |
| 20 | L | A | 1.5638 | |
| 21 | V | A | 0.2686 | |
| 22 | Q | A | -1.2016 | |
| 23 | P | A | -1.5782 | |
| 24 | G | A | -1.5399 | |
| 25 | G | A | -1.2443 | |
| 26 | S | A | -1.2333 | |
| 27 | L | A | -0.6650 | |
| 28 | K | A | -1.5358 | |
| 29 | L | A | 0.0000 | |
| 30 | S | A | -0.3449 | |
| 31 | C | A | 0.0000 | |
| 32 | A | A | -0.2939 | |
| 33 | A | A | -0.6856 | |
| 34 | S | A | -1.1009 | |
| 35 | G | A | -1.1847 | |
| 36 | F | A | -0.3007 | |
| 37 | T | A | -0.0123 | |
| 38 | F | A | 0.0000 | |
| 39 | S | A | -0.8175 | |
| 40 | T | A | -0.0336 | |
| 41 | Y | A | -0.0313 | |
| 42 | A | A | 0.0000 | |
| 43 | M | A | 0.0000 | |
| 44 | N | A | 0.0000 | |
| 45 | W | A | 0.0000 | |
| 46 | V | A | 0.0000 | |
| 47 | R | A | 0.0000 | |
| 48 | Q | A | -0.4214 | |
| 49 | A | A | 0.0000 | |
| 50 | P | A | -0.5217 | |
| 51 | G | A | -0.8258 | |
| 52 | K | A | -1.1074 | |
| 53 | G | A | -0.5898 | |
| 54 | L | A | -0.1525 | |
| 55 | E | A | -0.1866 | |
| 56 | W | A | 0.0000 | |
| 57 | V | A | 0.0000 | |
| 58 | G | A | 0.0000 | |
| 59 | R | A | -0.1053 | |
| 60 | I | A | 0.0000 | |
| 61 | R | A | -0.9300 | |
| 62 | S | A | -1.1689 | |
| 63 | K | A | -1.8838 | |
| 64 | Y | A | -0.4704 | |
| 65 | N | A | -1.6568 | |
| 66 | N | A | -1.8286 | |
| 67 | Y | A | -0.9874 | |
| 68 | A | A | -0.6717 | |
| 69 | T | A | -0.2003 | |
| 70 | Y | A | -0.1086 | |
| 71 | Y | A | -0.8074 | |
| 72 | A | A | -1.3814 | |
| 73 | D | A | -2.8386 | |
| 74 | S | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | K | A | -3.1250 | |
| 77 | D | A | -3.0355 | |
| 78 | R | A | -2.1125 | |
| 79 | F | A | 0.0000 | |
| 80 | T | A | -0.9627 | |
| 81 | I | A | 0.0000 | |
| 82 | S | A | -0.2920 | |
| 83 | R | A | -1.0134 | |
| 84 | D | A | -1.4764 | |
| 85 | D | A | -1.8320 | |
| 86 | S | A | -1.5963 | |
| 87 | K | A | -2.4097 | |
| 88 | N | A | -1.8380 | |
| 89 | T | A | -1.0836 | |
| 90 | L | A | 0.0000 | |
| 91 | Y | A | -0.3654 | |
| 92 | L | A | 0.0000 | |
| 93 | Q | A | -0.9927 | |
| 94 | M | A | 0.0000 | |
| 95 | N | A | -1.6377 | |
| 96 | S | A | -1.5509 | |
| 97 | L | A | 0.0000 | |
| 98 | R | A | -1.8001 | |
| 99 | A | A | -0.5674 | |
| 100 | E | A | 0.0000 | |
| 101 | D | A | 0.0000 | |
| 102 | T | A | 0.0000 | |
| 103 | A | A | 0.0000 | |
| 104 | V | A | -0.0020 | |
| 105 | Y | A | 0.0000 | |
| 106 | Y | A | 0.0000 | |
| 107 | C | A | 0.0000 | |
| 108 | V | A | 0.1364 | |
| 109 | R | A | -0.0714 | |
| 110 | H | A | 0.0000 | |
| 111 | G | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | F | A | 0.7292 | |
| 114 | G | A | -0.4689 | |
| 115 | N | A | -1.3095 | |
| 116 | S | A | -0.0815 | |
| 117 | Y | A | 1.0524 | |
| 118 | V | A | 1.7985 | |
| 119 | S | A | 0.0000 | |
| 120 | W | A | 0.1172 | |
| 121 | F | A | 0.0000 | |
| 122 | A | A | -0.3964 | |
| 123 | Y | A | 0.3422 | |
| 124 | W | A | 1.1157 | |
| 125 | G | A | 0.0914 | |
| 126 | Q | A | -0.1552 | |
| 127 | G | A | -0.2018 | |
| 128 | T | A | 0.0000 | |
| 129 | L | A | 1.2617 | |
| 130 | V | A | 0.0000 | |
| 131 | T | A | 0.6661 | |
| 132 | V | A | 1.2519 | |
| 133 | S | A | 0.0841 | |
| 134 | S | A | -0.3896 | |
| 135 | G | A | -0.8880 | |
| 136 | G | A | -1.1272 | |
| 137 | G | A | -1.3237 | |
| 138 | G | A | -1.4540 | |
| 139 | S | A | -1.4493 | |
| 140 | G | A | -1.5364 | |
| 141 | G | A | -1.7091 | |
| 142 | G | A | -1.5358 | |
| 143 | G | A | -1.6694 | |
| 144 | S | A | -1.2279 | |
| 145 | G | A | -1.2859 | |
| 146 | G | A | -1.1756 | |
| 147 | G | A | -1.3031 | |
| 148 | G | A | -1.5171 | |
| 149 | S | A | -1.5507 | |
| 150 | Q | A | -1.4484 | |
| 151 | T | A | 0.1021 | |
| 152 | V | A | 1.1407 | |
| 153 | V | A | 0.0000 | |
| 154 | T | A | -0.4155 | |
| 155 | Q | A | 0.0000 | |
| 156 | E | A | -0.8664 | |
| 157 | P | A | -0.8064 | |
| 158 | S | A | -0.6265 | |
| 159 | L | A | 0.0145 | |
| 160 | T | A | 0.3088 | |
| 161 | V | A | 0.3496 | |
| 162 | S | A | 0.0760 | |
| 163 | P | A | -0.5954 | |
| 164 | G | A | -0.9311 | |
| 165 | G | A | -0.6557 | |
| 166 | T | A | -0.4451 | |
| 167 | V | A | 0.0000 | |
| 168 | T | A | 0.0861 | |
| 169 | L | A | 0.0000 | |
| 170 | T | A | -0.3161 | |
| 171 | C | A | 0.0000 | |
| 172 | R | A | -1.5585 | |
| 173 | S | A | 0.0000 | |
| 174 | S | A | -0.3017 | |
| 175 | T | A | -0.4076 | |
| 176 | G | A | -0.6973 | |
| 177 | A | A | -0.4437 | |
| 178 | V | A | 0.0000 | |
| 179 | T | A | 0.1263 | |
| 180 | T | A | -0.0618 | |
| 181 | S | A | -0.0686 | |
| 182 | N | A | 0.1601 | |
| 183 | Y | A | 0.5332 | |
| 184 | A | A | 0.0000 | |
| 185 | N | A | -0.2949 | |
| 186 | W | A | 0.0000 | |
| 187 | V | A | -0.3326 | |
| 188 | Q | A | 0.0000 | |
| 189 | Q | A | -1.3141 | |
| 190 | K | A | -1.5576 | |
| 191 | P | A | -1.1251 | |
| 192 | G | A | -1.1711 | |
| 193 | Q | A | -1.2497 | |
| 194 | A | A | -0.8691 | |
| 195 | P | A | -0.9141 | |
| 196 | R | A | -1.1897 | |
| 197 | G | A | 0.0000 | |
| 198 | L | A | 0.0000 | |
| 199 | I | A | 0.0000 | |
| 200 | G | A | 0.0000 | |
| 201 | G | A | -0.3628 | |
| 202 | T | A | 0.0000 | |
| 203 | N | A | -1.6620 | |
| 204 | K | A | -1.5073 | |
| 205 | R | A | -1.4392 | |
| 206 | A | A | 0.0000 | |
| 207 | P | A | 0.5338 | |
| 208 | W | A | 0.8298 | |
| 209 | T | A | 0.0000 | |
| 210 | P | A | -0.0091 | |
| 211 | A | A | -0.1905 | |
| 212 | R | A | -0.4726 | |
| 213 | F | A | 0.0000 | |
| 214 | S | A | -0.9059 | |
| 215 | G | A | -0.7486 | |
| 216 | S | A | 0.0391 | |
| 217 | L | A | 0.8613 | |
| 218 | L | A | 1.4344 | |
| 219 | G | A | 0.0825 | |
| 220 | G | A | -0.2328 | |
| 221 | K | A | -0.4560 | |
| 222 | A | A | 0.0000 | |
| 223 | A | A | 0.0000 | |
| 224 | L | A | 0.0000 | |
| 225 | T | A | -0.2331 | |
| 226 | L | A | 0.0000 | |
| 227 | S | A | -0.6113 | |
| 228 | G | A | -0.7995 | |
| 229 | V | A | 0.0000 | |
| 230 | Q | A | -1.3227 | |
| 231 | P | A | -1.1315 | |
| 232 | E | A | -1.8611 | |
| 233 | D | A | 0.0000 | |
| 234 | E | A | -1.4742 | |
| 235 | A | A | 0.0000 | |
| 236 | E | A | -1.4080 | |
| 237 | Y | A | 0.0000 | |
| 238 | Y | A | 0.0000 | |
| 239 | C | A | 0.0000 | |
| 240 | A | A | 0.0000 | |
| 241 | L | A | 0.0000 | |
| 242 | W | A | 0.3870 | |
| 243 | Y | A | 0.1855 | |
| 244 | S | A | -0.3696 | |
| 245 | N | A | -0.4505 | |
| 246 | L | A | 0.3997 | |
| 247 | W | A | 0.5139 | |
| 248 | V | A | 0.7885 | |
| 249 | F | A | 0.5851 | |
| 250 | G | A | 0.0000 | |
| 251 | G | A | -0.4909 | |
| 252 | G | A | -0.7203 | |
| 253 | T | A | 0.0000 | |
| 254 | K | A | -1.2109 | |
| 255 | L | A | 0.0000 | |
| 256 | T | A | -0.1827 | |
| 257 | V | A | 0.2317 | |
| 258 | L | A | 1.3654 |