Project name: 6e1495798f61cc3

Status: done

Started: 2026-06-27 16:07:16
Settings
Chain sequence(s) A: EDEDEDEDEDEDGGKGHFG
C: EDEDEDEDEDEDGGKGHFG
B: EDEDEDEDEDEDGGKGHFG
D: EDEDEDEDEDEDGGKGHFG
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:49)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:50)
Show buried residues

Minimal score value
-6.9805
Maximal score value
1.7658
Average score
-4.0431
Total score value
-307.2718

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -4.6167
2 D A -5.6165
3 E A -6.5253
4 D A -6.4784
5 E A -6.3690
6 D A -5.5839
7 E A -5.7088
8 D A -5.3017
9 E A -5.3729
10 D A -4.9246
11 E A -4.7282
12 D A -4.1575
13 G A -2.8612
14 G A -3.0612
15 K A -3.0573
16 G A -1.2684
17 H A -0.5850
18 F A 1.7658
19 G A -0.0975
1 E B -4.3718
2 D B -5.9228
3 E B -6.4657
4 D B -6.7399
5 E B -6.4964
6 D B -6.2206
7 E B -6.0202
8 D B -5.5024
9 E B -5.8109
10 D B -5.7452
11 E B -5.3473
12 D B -4.8705
13 G B -3.4353
14 G B -2.6410
15 K B -2.6634
16 G B -1.0713
17 H B -0.3831
18 F B 1.6047
19 G B 0.4534
1 E C -4.4200
2 D C -5.9742
3 E C -6.5093
4 D C -6.9805
5 E C -6.6864
6 D C -6.5542
7 E C -6.0777
8 D C -5.3352
9 E C -5.5733
10 D C -5.7172
11 E C -5.3265
12 D C -4.9405
13 G C -3.3635
14 G C -2.7797
15 K C -2.8602
16 G C -1.1329
17 H C -0.3852
18 F C 1.6326
19 G C 0.6486
1 E D -4.6007
2 D D -5.6667
3 E D -6.6823
4 D D -6.8181
5 E D -6.8659
6 D D -6.5545
7 E D -6.0887
8 D D -5.3575
9 E D -5.3619
10 D D -4.8335
11 E D -4.8007
12 D D -4.3635
13 G D -2.9935
14 G D -3.3298
15 K D -2.9517
16 G D -1.3419
17 H D -0.3478
18 F D 1.7399
19 G D 0.4803
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Laboratory of Theory of Biopolymers 2018