| Chain sequence(s) |
A: LPAPKNLVVSEVTEDSLRLSVVTWPYADLDSFLIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVHNVYKDTNMRGLPLSAEFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:02)
[INFO] Main: Simulation completed successfully. (00:01:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.2683 | |
| 2 | P | A | 0.0358 | |
| 3 | A | A | -0.1221 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -2.0223 | |
| 6 | N | A | -1.3770 | |
| 7 | L | A | -0.1988 | |
| 8 | V | A | 0.7379 | |
| 9 | V | A | -0.2963 | |
| 10 | S | A | -0.8384 | |
| 11 | E | A | -2.0396 | |
| 12 | V | A | -0.9461 | |
| 13 | T | A | -1.7362 | |
| 14 | E | A | -3.0192 | |
| 15 | D | A | -2.6897 | |
| 16 | S | A | -2.1494 | |
| 17 | L | A | 0.0000 | |
| 18 | R | A | -1.8194 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.6408 | |
| 21 | V | A | 0.0000 | |
| 22 | V | A | 0.2122 | |
| 23 | T | A | -0.4972 | |
| 24 | W | A | -0.6187 | |
| 25 | P | A | -0.4095 | |
| 26 | Y | A | -0.0508 | |
| 27 | A | A | -0.7996 | |
| 28 | D | A | -2.1501 | |
| 29 | L | A | -1.8167 | |
| 30 | D | A | -2.4678 | |
| 31 | S | A | -1.7470 | |
| 32 | F | A | 0.0000 | |
| 33 | L | A | -0.3005 | |
| 34 | I | A | 0.0000 | |
| 35 | Q | A | -0.2795 | |
| 36 | Y | A | -0.3053 | |
| 37 | Q | A | -1.2008 | |
| 38 | E | A | -1.9635 | |
| 39 | S | A | -2.0027 | |
| 40 | E | A | -2.5005 | |
| 41 | K | A | -1.8556 | |
| 42 | V | A | 0.0338 | |
| 43 | G | A | -0.7653 | |
| 44 | E | A | -1.7564 | |
| 45 | A | A | -0.4856 | |
| 46 | I | A | 0.3962 | |
| 47 | N | A | -0.5530 | |
| 48 | L | A | 0.1732 | |
| 49 | T | A | -0.1409 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.2269 | |
| 52 | G | A | -1.7418 | |
| 53 | S | A | -1.6551 | |
| 54 | E | A | -1.8494 | |
| 55 | R | A | -1.9299 | |
| 56 | S | A | -1.4323 | |
| 57 | Y | A | 0.0000 | |
| 58 | D | A | -2.3048 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.5227 | |
| 61 | G | A | -1.4898 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -3.0361 | |
| 64 | P | A | -2.6357 | |
| 65 | G | A | -1.8965 | |
| 66 | T | A | -2.2400 | |
| 67 | E | A | -2.7046 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -1.4279 | |
| 70 | V | A | 0.0000 | |
| 71 | S | A | 0.0000 | |
| 72 | I | A | 0.0000 | |
| 73 | Y | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -1.2878 | |
| 76 | H | A | -1.5058 | |
| 77 | N | A | -1.8552 | |
| 78 | V | A | 0.0134 | |
| 79 | Y | A | 0.1097 | |
| 80 | K | A | -2.0195 | |
| 81 | D | A | -2.3981 | |
| 82 | T | A | -1.5225 | |
| 83 | N | A | -2.2228 | |
| 84 | M | A | -1.2691 | |
| 85 | R | A | -1.5462 | |
| 86 | G | A | 0.0000 | |
| 87 | L | A | 1.1820 | |
| 88 | P | A | 0.5230 | |
| 89 | L | A | 0.0545 | |
| 90 | S | A | -0.4037 | |
| 91 | A | A | -0.8053 | |
| 92 | E | A | -2.1365 | |
| 93 | F | A | 0.0000 | |
| 94 | T | A | -1.6283 | |
| 95 | T | A | -1.9303 |