| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGRVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHCTADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFHVRCGPVGHPLPDAPPPSPLYTPPPPTSPYATRPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPETNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9443 | |
| 2 | L | A | 1.9645 | |
| 3 | P | A | 0.8328 | |
| 4 | P | A | 0.3775 | |
| 5 | T | A | 0.1249 | |
| 6 | T | A | 0.1311 | |
| 7 | P | A | 0.1916 | |
| 8 | V | A | 1.2110 | |
| 9 | A | A | 0.0806 | |
| 10 | K | A | -1.0409 | |
| 11 | V | A | -0.1950 | |
| 12 | Q | A | -1.4233 | |
| 13 | S | A | -1.5569 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4012 | |
| 16 | E | A | -2.4317 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4636 | |
| 20 | P | A | 0.1302 | |
| 21 | T | A | 0.1615 | |
| 22 | S | A | -0.0956 | |
| 23 | L | A | 0.0964 | |
| 24 | F | A | -0.0373 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2894 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8979 | |
| 31 | R | A | -2.6744 | |
| 32 | L | A | -0.7842 | |
| 33 | L | A | 1.1620 | |
| 34 | T | A | 1.3562 | |
| 35 | V | A | 1.7989 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2586 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6192 | |
| 40 | K | A | -1.6722 | |
| 41 | D | A | -0.7282 | |
| 42 | I | A | 1.2458 | |
| 43 | V | A | 2.1934 | |
| 44 | V | A | 1.6250 | |
| 45 | N | A | -0.5781 | |
| 46 | G | A | -0.4418 | |
| 47 | R | A | -0.2888 | |
| 48 | V | A | 1.9572 | |
| 49 | L | A | 2.4840 | |
| 50 | V | A | 1.4169 | |
| 51 | P | A | 0.3157 | |
| 52 | K | A | -0.6968 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1330 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3653 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2294 | |
| 70 | K | A | -1.7772 | |
| 71 | F | A | -0.6398 | |
| 72 | A | A | -0.5848 | |
| 73 | L | A | -0.8842 | |
| 74 | P | A | -1.2198 | |
| 75 | Q | A | -2.5090 | |
| 76 | K | A | -3.1139 | |
| 77 | D | A | -2.9962 | |
| 78 | F | A | -1.6747 | |
| 79 | Y | A | -1.9056 | |
| 80 | D | A | -2.7154 | |
| 81 | P | A | -2.3190 | |
| 82 | E | A | -3.0626 | |
| 83 | K | A | -3.4110 | |
| 84 | E | A | -2.4760 | |
| 85 | R | A | -1.2996 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6907 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9603 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3578 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6885 | |
| 99 | G | A | -0.5208 | |
| 100 | P | A | -0.3781 | |
| 101 | L | A | 0.0977 | |
| 102 | G | A | -0.2098 | |
| 103 | K | A | -0.6576 | |
| 104 | G | A | -0.4742 | |
| 105 | T | A | -0.4530 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1566 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4533 | |
| 110 | L | A | 0.4211 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0578 | |
| 113 | K | A | -0.3874 | |
| 114 | L | A | -0.6686 | |
| 115 | G | A | -0.7521 | |
| 116 | D | A | -1.3590 | |
| 117 | T | A | -0.8952 | |
| 118 | E | A | -1.8412 | |
| 119 | N | A | -2.0244 | |
| 120 | P | A | -1.3764 | |
| 121 | T | A | -0.6878 | |
| 122 | A | A | -0.3437 | |
| 123 | P | A | -0.0365 | |
| 124 | V | A | 0.0406 | |
| 125 | H | A | -0.3073 | |
| 126 | C | A | -0.3609 | |
| 127 | T | A | -0.7274 | |
| 128 | A | A | -0.9614 | |
| 129 | D | A | -1.9987 | |
| 130 | D | A | -1.4560 | |
| 131 | R | A | -0.9935 | |
| 132 | V | A | 0.3091 | |
| 133 | A | A | 0.4837 | |
| 134 | F | A | 0.3120 | |
| 135 | S | A | -0.0635 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.4517 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5690 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2143 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0953 | |
| 157 | D | A | 0.2634 | |
| 158 | I | A | 0.8123 | |
| 159 | A | A | 0.1102 | |
| 160 | E | A | -1.4819 | |
| 161 | P | A | -0.2249 | |
| 162 | C | A | 0.1919 | |
| 163 | P | A | -0.1639 | |
| 164 | G | A | -0.0608 | |
| 165 | L | A | 0.6301 | |
| 166 | P | A | -0.0967 | |
| 167 | P | A | -0.3320 | |
| 168 | G | A | -0.4408 | |
| 169 | A | A | -0.0147 | |
| 170 | C | A | 0.7457 | |
| 171 | P | A | 0.5501 | |
| 172 | P | A | 0.7769 | |
| 173 | I | A | 2.0415 | |
| 174 | Q | A | 0.8457 | |
| 175 | L | A | 1.4469 | |
| 176 | V | A | 0.8383 | |
| 177 | N | A | -0.2951 | |
| 178 | S | A | 0.0389 | |
| 179 | V | A | 0.4415 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3789 | |
| 182 | D | A | 0.0800 | |
| 183 | G | A | -0.1639 | |
| 184 | D | A | -0.5452 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1193 | |
| 190 | F | A | 0.0620 | |
| 191 | G | A | -0.1077 | |
| 192 | N | A | -0.2748 | |
| 193 | M | A | -0.1459 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3988 | |
| 197 | E | A | -2.6365 | |
| 198 | L | A | -1.2334 | |
| 199 | Q | A | -2.5498 | |
| 200 | Q | A | -3.3202 | |
| 201 | D | A | -3.5954 | |
| 202 | R | A | -3.3142 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1979 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3480 | |
| 211 | S | A | -1.8713 | |
| 212 | T | A | -1.4390 | |
| 213 | R | A | -2.1174 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1675 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3244 | |
| 220 | L | A | 0.5799 | |
| 221 | K | A | -1.1599 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8313 | |
| 224 | N | A | -1.5097 | |
| 225 | E | A | -1.2468 | |
| 226 | A | A | -0.6059 | |
| 227 | Y | A | -0.3640 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6662 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0749 | |
| 234 | F | A | 0.2535 | |
| 235 | G | A | -0.8093 | |
| 236 | R | A | -2.5795 | |
| 237 | R | A | -2.8104 | |
| 238 | E | A | -2.0718 | |
| 239 | Q | A | -0.1301 | |
| 240 | V | A | 1.4706 | |
| 241 | Y | A | 1.1901 | |
| 242 | A | A | 0.3158 | |
| 243 | R | A | -0.7519 | |
| 244 | H | A | -0.9376 | |
| 245 | F | A | 0.0161 | |
| 246 | H | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.3083 | |
| 249 | C | A | -0.5547 | |
| 250 | G | A | -0.7726 | |
| 251 | P | A | -0.5578 | |
| 252 | V | A | -0.6319 | |
| 253 | G | A | -0.9374 | |
| 254 | H | A | -1.1632 | |
| 255 | P | A | -0.9429 | |
| 256 | L | A | -0.2542 | |
| 257 | P | A | -0.8599 | |
| 258 | D | A | -1.8893 | |
| 259 | A | A | -0.9012 | |
| 260 | P | A | -0.9399 | |
| 261 | P | A | -0.6314 | |
| 262 | P | A | -0.3193 | |
| 263 | S | A | -0.1402 | |
| 264 | P | A | 0.3984 | |
| 265 | L | A | 1.4928 | |
| 266 | Y | A | 0.6321 | |
| 267 | T | A | 0.0589 | |
| 268 | P | A | -0.3753 | |
| 269 | P | A | -0.2313 | |
| 270 | P | A | -0.3624 | |
| 271 | P | A | -0.3421 | |
| 272 | T | A | -0.2126 | |
| 273 | S | A | -0.1310 | |
| 274 | P | A | -0.0720 | |
| 275 | Y | A | 0.3412 | |
| 276 | A | A | -0.0647 | |
| 277 | T | A | -0.3531 | |
| 278 | R | A | -0.5705 | |
| 279 | P | A | -0.3577 | |
| 280 | P | A | 0.0000 | |
| 281 | Y | A | 0.0817 | |
| 282 | D | A | -0.3503 | |
| 283 | Y | A | 1.0434 | |
| 284 | F | A | 0.7701 | |
| 285 | G | A | 0.2796 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8547 | |
| 291 | L | A | 1.6247 | |
| 292 | V | A | 0.6455 | |
| 293 | S | A | -0.1481 | |
| 294 | S | A | -0.9503 | |
| 295 | D | A | -1.8428 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1042 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6477 | |
| 301 | R | A | -1.8517 | |
| 302 | P | A | -0.9555 | |
| 303 | F | A | -0.2013 | |
| 304 | W | A | -0.5747 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0925 | |
| 307 | R | A | -2.8369 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2697 | |
| 310 | G | A | -1.2277 | |
| 311 | N | A | -1.2758 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7547 | |
| 319 | N | A | -0.8301 | |
| 320 | E | A | -1.0256 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3331 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0957 | |
| 333 | N | A | 0.5343 | |
| 334 | F | A | 1.7398 | |
| 335 | T | A | 0.8622 | |
| 336 | I | A | 0.4562 | |
| 337 | S | A | -0.7926 | |
| 338 | Q | A | -1.4409 | |
| 339 | Q | A | -1.1258 | |
| 340 | L | A | 0.6099 | |
| 341 | C | A | -0.0636 | |
| 342 | T | A | -0.4583 | |
| 343 | P | A | -1.1717 | |
| 344 | E | A | -1.7422 | |
| 345 | T | A | -0.8936 | |
| 346 | N | A | -0.6952 | |
| 347 | V | A | 1.2806 | |
| 348 | Y | A | 1.2470 | |
| 349 | D | A | 0.0274 | |
| 350 | P | A | -0.2855 | |
| 351 | S | A | -0.2263 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.4548 | |
| 354 | K | A | -1.5842 | |
| 355 | N | A | -1.6618 | |
| 356 | Y | A | -0.0937 | |
| 357 | L | A | 0.6354 | |
| 358 | R | A | 0.9553 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3682 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0726 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0331 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6859 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2726 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3195 | |
| 376 | L | A | -1.7155 | |
| 377 | D | A | -2.0041 | |
| 378 | P | A | -1.0455 | |
| 379 | G | A | -1.0203 | |
| 380 | V | A | -0.9403 | |
| 381 | L | A | -0.5357 | |
| 382 | A | A | -0.6582 | |
| 383 | H | A | -0.8125 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4150 | |
| 386 | T | A | -0.5576 | |
| 387 | M | A | -0.3060 | |
| 388 | N | A | -0.8688 | |
| 389 | P | A | -1.2347 | |
| 390 | T | A | -1.3935 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.3549 | |
| 393 | E | A | -2.6643 | |
| 394 | N | A | -2.3867 | |
| 395 | W | A | -1.2255 | |
| 396 | N | A | -0.8938 | |
| 397 | L | A | -0.1102 | |
| 398 | G | A | 0.5902 | |
| 399 | F | A | 2.4474 | |
| 400 | V | A | 1.8616 | |
| 401 | P | A | 0.0703 | |
| 402 | P | A | -1.7525 | |
| 403 | K | A | -3.3042 | |
| 404 | E | A | -3.8219 | |
| 405 | R | A | -3.8344 | |
| 406 | E | A | -3.7414 | |
| 407 | D | A | -2.8193 | |
| 408 | P | A | -1.7388 | |
| 409 | Y | A | -0.9683 | |
| 410 | K | A | -2.0986 | |
| 411 | G | A | -0.6203 | |
| 412 | L | A | 0.6882 | |
| 413 | I | A | 1.5903 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3944 | |
| 416 | E | A | -1.6872 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9512 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0502 | |
| 421 | E | A | -2.7916 | |
| 422 | R | A | -2.6574 | |
| 423 | F | A | -1.3308 | |
| 424 | S | A | -1.4680 | |
| 425 | Q | A | -1.8353 | |
| 426 | D | A | -2.8875 | |
| 427 | L | A | -1.9941 | |
| 428 | D | A | -2.7698 | |
| 429 | Q | A | -2.6120 | |
| 430 | F | A | -1.4393 | |
| 431 | A | A | -0.9337 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.7003 | |
| 435 | K | A | -0.7770 | |
| 436 | F | A | 0.1011 | |
| 437 | L | A | 0.9887 | |
| 438 | Y | A | 0.7898 | |
| 439 | Q | A | -0.2976 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine