| Chain sequence(s) |
L: KGRMTYCPLPGYEPWD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:21)
[INFO] Main: Simulation completed successfully. (00:00:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 285 | K | L | -1.7846 | |
| 286 | G | L | -1.1130 | |
| 287 | R | L | -1.7962 | |
| 288 | M | L | 0.3933 | |
| 289 | T | L | 0.3058 | |
| 290 | Y | L | 1.4364 | |
| 291 | C | L | 0.9519 | |
| 292 | P | L | 0.2995 | |
| 293 | L | L | 1.4810 | |
| 294 | P | L | -0.0645 | |
| 295 | G | L | -0.3854 | |
| 296 | Y | L | 0.2822 | |
| 297 | E | L | -1.7384 | |
| 298 | P | L | -0.3612 | |
| 299 | W | L | 0.8156 | |
| 300 | D | L | -1.5734 |