| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPRTPKHYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYLYQLPLPSKPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:44)
[INFO] Main: Simulation completed successfully. (00:00:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.2779 | |
| 2 | S | A | -0.3353 | |
| 3 | D | A | -1.2135 | |
| 4 | V | A | -1.2138 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.6803 | |
| 7 | D | A | -3.5752 | |
| 8 | L | A | -2.2768 | |
| 9 | E | A | -2.1021 | |
| 10 | V | A | 0.1115 | |
| 11 | V | A | 1.5439 | |
| 12 | A | A | 0.8899 | |
| 13 | A | A | 0.2989 | |
| 14 | T | A | -0.5324 | |
| 15 | P | A | -1.1360 | |
| 16 | T | A | -1.0048 | |
| 17 | S | A | -0.5344 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7301 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1693 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.6156 | |
| 24 | A | A | -2.4150 | |
| 25 | P | A | -1.9316 | |
| 26 | R | A | -2.3516 | |
| 27 | T | A | -1.8228 | |
| 28 | P | A | -1.7630 | |
| 29 | K | A | -1.8921 | |
| 30 | H | A | -0.3397 | |
| 31 | Y | A | 0.6863 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.2985 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.5279 | |
| 39 | T | A | -1.2331 | |
| 40 | G | A | -1.2227 | |
| 41 | G | A | -1.3520 | |
| 42 | N | A | -1.5282 | |
| 43 | S | A | -0.8293 | |
| 44 | P | A | -0.3159 | |
| 45 | V | A | 0.4284 | |
| 46 | Q | A | -0.8509 | |
| 47 | E | A | -1.7212 | |
| 48 | F | A | -0.7708 | |
| 49 | T | A | 0.0032 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.6139 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.4184 | |
| 54 | K | A | -1.7621 | |
| 55 | S | A | -1.5402 | |
| 56 | T | A | -0.7093 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2326 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6571 | |
| 61 | G | A | -1.0307 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3698 | |
| 64 | P | A | -1.6607 | |
| 65 | G | A | -1.4412 | |
| 66 | V | A | -1.4323 | |
| 67 | D | A | -2.0454 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7975 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.2423 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.1504 | |
| 74 | L | A | 0.0000 | |
| 75 | Y | A | 1.7085 | |
| 76 | Q | A | 1.1039 | |
| 77 | L | A | 1.9364 | |
| 78 | P | A | 1.3505 | |
| 79 | L | A | 1.6108 | |
| 80 | P | A | 0.5310 | |
| 81 | S | A | -0.2251 | |
| 82 | K | A | -1.6066 | |
| 83 | P | A | -0.9411 | |
| 84 | I | A | -1.0008 | |
| 85 | S | A | -0.9403 | |
| 86 | I | A | -0.7399 | |
| 87 | N | A | -1.7169 | |
| 88 | Y | A | -1.4192 | |
| 89 | R | A | -2.4985 | |
| 90 | T | A | -1.6264 |