Project name: query_structure

Status: done

Started: 2026-03-16 19:56:23
Settings
Chain sequence(s) A: AVCSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGGGNRNNFESEDYCMVCKAM
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:20)
Show buried residues

Minimal score value
-2.3789
Maximal score value
1.8511
Average score
-0.614
Total score value
-33.1581

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.0319
2 V A -0.5625
3 C A -0.2446
4 S A -0.5940
5 Q A -1.6023
6 E A -2.1030
7 A A -1.1524
8 M A -0.4615
9 T A 0.1831
10 G A -0.3439
11 P A -0.5855
12 C A -0.4599
13 R A -1.1266
14 A A 0.3003
15 V A 1.8511
16 M A 0.9990
17 P A 0.0366
18 R A -0.8645
19 W A -1.2543
20 Y A -0.8736
21 F A 0.0000
22 D A -1.2771
23 L A -0.2175
24 S A -0.6918
25 K A -1.8881
26 G A -1.5186
27 K A -2.1442
28 C A -1.3175
29 V A -1.0768
30 R A -1.6209
31 F A 0.3098
32 I A 1.3151
33 Y A 0.5650
34 G A 0.0000
35 G A 0.0000
36 G A -0.8819
37 G A -0.9088
38 N A -1.5022
39 R A -2.2243
40 N A 0.0000
41 N A -1.3780
42 F A 0.0000
43 E A -2.3789
44 S A -1.9876
45 E A -2.3030
46 D A -1.6787
47 Y A -0.1023
48 C A 0.0000
49 M A -0.2910
50 V A 0.7402
51 C A 0.0000
52 K A -0.8495
53 A A 0.1604
54 M A 0.8805
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Laboratory of Theory of Biopolymers 2018