Project name: query_structure

Status: done

Started: 2026-03-17 00:55:00
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Chain sequence(s) A: QVQLVESGGGSVQAGGSLRLSATASGGSEYSYSTFSLGWFRQAPGQEREAVCAIASMGGLTYYADSVKGRFTCSRDNAKNTVTLQMNNLKPEDTAIYYVAAVRGYFMRLPSSHNFRYWGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:05)
Show buried residues

Minimal score value
-3.403
Maximal score value
2.0272
Average score
-0.7461
Total score value
-95.4964

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.5321
2 V A -1.3803
3 Q A -1.3987
4 L A 0.0000
5 V A 0.0551
6 E A -0.5583
7 S A -0.9376
8 G A -1.3340
9 G A -1.2418
10 G A -0.9628
11 S A -0.7280
12 V A -0.7800
13 Q A -1.7390
14 A A -1.8689
15 G A -1.8074
16 G A -1.4232
17 S A -1.4619
18 L A -1.2437
19 R A -2.1270
20 L A 0.0000
21 S A -0.7155
22 A A 0.0000
23 T A -0.6280
24 A A 0.0000
25 S A -0.8414
26 G A -1.5976
27 G A -1.5091
28 S A -1.3460
29 E A -2.0180
30 Y A -1.4551
31 S A -1.1976
32 Y A 0.0000
33 S A -0.2186
34 T A -0.3910
35 F A 0.0000
36 S A 0.0000
37 L A 0.0000
38 G A 0.0000
39 W A 0.0000
40 F A 0.0000
41 R A -1.2981
42 Q A -1.9384
43 A A -1.8082
44 P A -1.2518
45 G A -1.7397
46 Q A -2.8727
47 E A -3.4030
48 R A -2.8560
49 E A -1.9156
50 A A -0.7871
51 V A 0.0000
52 C A 0.0000
53 A A 0.0000
54 I A 0.0000
55 A A 1.0838
56 S A 0.8010
57 M A 0.9785
58 G A 0.2318
59 G A 0.5853
60 L A 1.5955
61 T A 0.7235
62 Y A 0.5234
63 Y A -0.7441
64 A A 0.0000
65 D A -2.4060
66 S A -1.7626
67 V A 0.0000
68 K A -2.5578
69 G A -1.8509
70 R A -1.6383
71 F A 0.0000
72 T A -0.7700
73 C A 0.0000
74 S A -0.5584
75 R A -0.9332
76 D A -1.4558
77 N A -1.4125
78 A A -1.3364
79 K A -2.1792
80 N A -1.4529
81 T A -1.0709
82 V A 0.0000
83 T A -0.7791
84 L A 0.0000
85 Q A -1.0806
86 M A 0.0000
87 N A -1.7967
88 N A -2.2639
89 L A 0.0000
90 K A -2.5895
91 P A -1.8840
92 E A -2.3104
93 D A 0.0000
94 T A -1.1248
95 A A 0.0000
96 I A -0.4902
97 Y A 0.0000
98 Y A -0.4408
99 V A 0.0000
100 A A 0.0000
101 A A 0.0000
102 V A 0.0000
103 R A -1.6133
104 G A 0.3545
105 Y A 1.9529
106 F A 2.0272
107 M A 1.1606
108 R A -0.4904
109 L A 0.8973
110 P A 0.1692
111 S A -0.7568
112 S A -1.3856
113 H A -1.6249
114 N A -1.3275
115 F A 0.0000
116 R A -2.1351
117 Y A -0.9556
118 W A -0.3201
119 G A -0.4613
120 Q A -1.2557
121 G A -0.7428
122 T A 0.0000
123 Q A -1.4262
124 V A 0.0000
125 T A -0.9495
126 V A 0.0000
127 S A -1.1427
128 S A -0.8463
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Laboratory of Theory of Biopolymers 2018