Project name: RVAC_29_03_2026 [mutate: YH5A] [mutate: LM15A] [mutate: TS16A]

Status: done

Started: 2026-04-02 10:17:43
Settings
Chain sequence(s) A: MDTPHANSTQEEPFMTSTLCLYYPTEAATEINDTEWKDTLSQLFLTKGWPTGSVYFKEYTDIASFSVDPQLYCDYNIVLMKYDSNLELDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQTLGIGCLTTDTNTFEEVATAEKLVITDVVDGVNHKLDVTTNTCTIRNCKKLGPRENVAVIQVGGSNILDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVNQIVQVMSKRSRSLNSAAFYYRV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues TS16A
Energy difference between WT (input) and mutated protein (by FoldX) -0.21281 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:59)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:01:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:00)
Show buried residues

Minimal score value
-3.2395
Maximal score value
2.6181
Average score
-0.6114
Total score value
-161.4064

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.1615
2 D A -1.5207
3 T A -1.0356
4 P A -1.3048
5 H A -1.7371
6 A A -1.1988
7 N A -1.8904
8 S A -1.7193
9 T A -2.0734
10 Q A -3.0292
11 E A -3.2395
12 E A -2.9354
13 P A -1.8140
14 F A -0.6554
15 M A 0.1128
16 S A -0.0230 mutated: TS16A
17 S A 0.0000
18 T A 0.1217
19 L A 0.0000
20 C A 0.0000
21 L A 0.0000
22 Y A 0.0000
23 Y A 0.0000
24 P A 0.0000
25 T A -0.9528
26 E A -1.1033
27 A A 0.0000
28 A A -1.0345
29 T A -1.1045
30 E A -1.3318
31 I A 0.0000
32 N A -2.0870
33 D A -2.0875
34 T A -1.9782
35 E A -3.0514
36 W A 0.0000
37 K A -2.1481
38 D A -2.9892
39 T A -1.9008
40 L A 0.0000
41 S A -1.3618
42 Q A -1.4537
43 L A -0.5680
44 F A 0.0000
45 L A -0.0920
46 T A -0.3926
47 K A -0.6860
48 G A -0.2946
49 W A 0.0000
50 P A -0.0967
51 T A -0.5338
52 G A -0.3027
53 S A 0.0000
54 V A 0.2434
55 Y A 0.2856
56 F A -0.1807
57 K A -1.1651
58 E A -1.4707
59 Y A 0.0000
60 T A -0.7687
61 D A -0.9389
62 I A 0.0000
63 A A 0.0000
64 S A -0.6103
65 F A 0.0000
66 S A 0.0000
67 V A -0.2885
68 D A -1.8163
69 P A -1.1817
70 Q A -1.3614
71 L A 0.0000
72 Y A 0.8458
73 C A 0.0000
74 D A -0.7174
75 Y A 0.0000
76 N A 0.0000
77 I A 0.0000
78 V A 0.0000
79 L A 0.0000
80 M A 0.0000
81 K A -0.7806
82 Y A -1.0476
83 D A -1.5282
84 S A -1.7686
85 N A -1.8658
86 L A -1.7466
87 E A -2.8042
88 L A 0.0000
89 D A -2.4848
90 M A 0.0000
91 S A -1.2005
92 E A -1.2047
93 L A 0.0000
94 A A 0.0000
95 D A -1.4111
96 L A 0.0000
97 I A 0.0000
98 L A 0.0000
99 N A -0.7931
100 E A -0.7309
101 W A -0.3332
102 L A 0.6089
103 C A -0.2001
104 N A -1.4591
105 P A -1.3735
106 M A 0.0000
107 D A -0.5170
108 I A 0.3719
109 T A 0.7687
110 L A 2.0338
111 Y A 2.0364
112 Y A 1.3007
113 Y A 0.2639
114 Q A -0.9161
115 Q A 0.0000
116 T A -1.6910
117 D A -2.6522
118 E A -2.9429
119 A A -1.9793
120 N A 0.0000
121 K A -1.9817
122 W A 0.0000
123 I A 0.0000
124 S A 0.0000
125 M A 0.0000
126 G A -0.8269
127 S A -0.8428
128 S A -0.8933
129 C A 0.0000
130 T A -0.6207
131 I A 0.0000
132 K A -1.7351
133 V A 0.0000
134 C A 0.0000
135 P A 0.5383
136 L A 0.0000
137 N A -0.3027
138 T A -0.7691
139 Q A -1.0875
140 T A -0.0903
141 L A 1.0666
142 G A 1.1782
143 I A 1.9143
144 G A 0.6264
145 C A 0.6576
146 L A 1.4983
147 T A 0.6825
148 T A 0.0096
149 D A -0.6062
150 T A -1.2960
151 N A -1.8696
152 T A -1.1665
153 F A 0.0000
154 E A -2.7641
155 E A -2.3583
156 V A -0.6664
157 A A 0.0000
158 T A -0.5465
159 A A -0.5852
160 E A -1.5418
161 K A -1.4917
162 L A 0.0000
163 V A 0.0000
164 I A -0.4338
165 T A 0.0000
166 D A -1.8020
167 V A -0.6750
168 V A 0.0423
169 D A -2.1273
170 G A -1.1701
171 V A -0.4009
172 N A -0.4446
173 H A 0.0000
174 K A 0.3394
175 L A 0.0000
176 D A -1.2392
177 V A 0.0000
178 T A -0.6428
179 T A -0.8055
180 N A -1.3945
181 T A -0.9118
182 C A 0.0000
183 T A -0.6916
184 I A 0.0000
185 R A -1.2224
186 N A -1.2451
187 C A 0.0000
188 K A -1.5870
189 K A -1.1989
190 L A 0.0427
191 G A -0.6015
192 P A -1.2857
193 R A -1.3752
194 E A -2.0226
195 N A -1.3147
196 V A 0.0000
197 A A 0.0000
198 V A 0.0000
199 I A 0.0000
200 Q A 0.0000
201 V A 0.0000
202 G A -1.2277
203 G A -0.8848
204 S A -0.4185
205 N A -0.6846
206 I A 0.9778
207 L A 0.3053
208 D A -0.9707
209 I A -0.7627
210 T A -0.6967
211 A A -1.2377
212 D A -1.9580
213 P A -1.5002
214 T A -0.9080
215 T A -0.8528
216 A A -0.8621
217 P A -1.3060
218 Q A -1.9954
219 T A -1.5342
220 E A -2.4161
221 R A -1.4745
222 M A 0.0000
223 M A -0.6861
224 R A -0.9712
225 I A 0.0000
226 N A -1.8249
227 W A -1.4658
228 K A -2.2258
229 K A -1.7855
230 W A 0.0000
231 W A -0.4427
232 Q A -0.8268
233 V A 0.0000
234 F A 0.0000
235 Y A 0.2670
236 T A -0.2120
237 V A 0.0000
238 V A 0.0000
239 D A -1.3774
240 Y A -0.3409
241 V A 0.0000
242 N A -1.0893
243 Q A -0.9991
244 I A -0.3694
245 V A 0.0000
246 Q A -1.0055
247 V A 0.0284
248 M A 0.0000
249 S A -1.2908
250 K A -1.8340
251 R A -1.8506
252 S A -1.6541
253 R A -2.0335
254 S A -0.9919
255 L A 0.2331
256 N A -0.5300
257 S A -0.0667
258 A A 0.4830
259 A A 1.4158
260 F A 2.5826
261 Y A 2.6181
262 Y A 2.0962
263 R A 0.2966
264 V A 1.3961
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Laboratory of Theory of Biopolymers 2018