| Chain sequence(s) |
A: DNAITNLLAGRVSQMRMLPLGVLS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19)
[INFO] Main: Simulation completed successfully. (00:00:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.9300 | |
| 2 | N | A | -1.4532 | |
| 3 | A | A | 0.0554 | |
| 4 | I | A | 1.5576 | |
| 5 | T | A | 0.1969 | |
| 6 | N | A | -0.0963 | |
| 7 | L | A | 1.9110 | |
| 8 | L | A | 1.9412 | |
| 9 | A | A | 0.9067 | |
| 10 | G | A | -0.0322 | |
| 11 | R | A | -0.7617 | |
| 12 | V | A | 0.8767 | |
| 13 | S | A | -0.1504 | |
| 14 | Q | A | -0.7677 | |
| 15 | M | A | 0.0435 | |
| 16 | R | A | -0.6290 | |
| 17 | M | A | 1.1536 | |
| 18 | L | A | 2.0188 | |
| 19 | P | A | 1.3711 | |
| 20 | L | A | 1.9187 | |
| 21 | G | A | 1.7534 | |
| 22 | V | A | 2.9003 | |
| 23 | L | A | 2.8026 | |
| 24 | S | A | 1.2937 |