| Chain sequence(s) |
A: GGTALAIEGPTLRQWLAARA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.7140 | |
| 2 | G | A | -0.5063 | |
| 3 | T | A | 0.1360 | |
| 4 | A | A | 1.1107 | |
| 5 | L | A | 2.0832 | |
| 6 | A | A | 1.3585 | |
| 7 | I | A | 1.6578 | |
| 8 | E | A | -0.9175 | |
| 9 | G | A | -0.6144 | |
| 10 | P | A | -0.5530 | |
| 11 | T | A | -0.1042 | |
| 12 | L | A | 0.9795 | |
| 13 | R | A | -1.3926 | |
| 14 | Q | A | -1.3575 | |
| 15 | W | A | -0.0234 | |
| 16 | L | A | -0.1350 | |
| 17 | A | A | -0.5562 | |
| 18 | A | A | -0.7190 | |
| 19 | R | A | -1.6515 | |
| 20 | A | A | -0.4763 |