Project name: query_structure

Status: done

Started: 2026-03-16 23:21:17
Settings
Chain sequence(s) A: GGTALAIEGPTLRQWLAARA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:16)
Show buried residues

Minimal score value
-1.6515
Maximal score value
2.0832
Average score
-0.1198
Total score value
-2.3952

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.7140
2 G A -0.5063
3 T A 0.1360
4 A A 1.1107
5 L A 2.0832
6 A A 1.3585
7 I A 1.6578
8 E A -0.9175
9 G A -0.6144
10 P A -0.5530
11 T A -0.1042
12 L A 0.9795
13 R A -1.3926
14 Q A -1.3575
15 W A -0.0234
16 L A -0.1350
17 A A -0.5562
18 A A -0.7190
19 R A -1.6515
20 A A -0.4763
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Laboratory of Theory of Biopolymers 2018