Project name: 6f05e2fe7620d07

Status: done

Started: 2024-12-30 06:28:21
Settings
Chain sequence(s) C: MDVTIQHPWFKRTLGPFYPSRLFDQFFGEGLFEYDLLPFLSSTISPYYRQSLFRTVLDSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTFCGPKIQTGLDATHAERAIPVSREEKPTSAPSS
input PDB
Selected Chain(s) C
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with C chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:34)
Show buried residues

Minimal score value
-3.8375
Maximal score value
1.528
Average score
-0.6839
Total score value
-118.3136

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M C -1.1076
2 D C -1.5809
3 V C -0.4037
4 T C 0.0914
5 I C 1.2275
6 Q C -0.6647
7 H C -1.1114
8 P C 0.0000
9 W C 0.4287
10 F C 0.9657
11 K C 0.0000
12 R C 0.0000
13 T C 0.0000
14 L C 0.6989
15 G C 0.3643
16 P C 0.4075
17 F C 0.6486
18 Y C 0.5385
19 P C 0.3146
20 S C 0.0000
21 R C -0.3747
22 L C 0.6608
23 F C 0.0000
24 D C -0.4076
25 Q C -0.7115
26 F C 0.2274
27 F C 0.1905
28 G C -0.7689
29 E C -1.6534
30 G C -0.5918
31 L C 0.7089
32 F C 0.1394
33 E C -1.1118
34 Y C 0.0620
35 D C -0.7236
36 L C 1.1878
37 L C 0.8904
38 P C 0.6515
39 F C 0.6805
40 L C 1.5280
41 S C 0.8766
42 S C 0.7147
43 T C 0.3316
44 I C 0.7476
45 S C 0.5587
46 P C 0.4296
47 Y C 0.4803
48 Y C 0.1740
49 R C -1.1262
50 Q C 0.0000
51 S C -0.7990
52 L C -0.1242
53 F C 0.0000
54 R C -2.0231
55 T C -0.8454
56 V C -0.4918
57 L C 0.0000
58 D C -1.7426
59 S C -1.0195
60 G C -0.6784
61 I C 0.3001
62 S C 0.0000
63 E C -1.3996
64 V C 0.0000
65 R C -1.2593
66 S C 0.0000
67 D C -1.9526
68 R C -2.6824
69 D C -1.8121
70 K C -1.6928
71 F C 0.0000
72 V C 0.0000
73 I C 0.0000
74 F C -0.2474
75 L C 0.0000
76 D C -2.1479
77 V C -1.8018
78 K C -2.7221
79 H C -2.8281
80 F C 0.0000
81 S C -1.9539
82 P C -1.6725
83 E C -2.1184
84 D C -2.2276
85 L C 0.0000
86 T C -0.4823
87 V C 0.0000
88 K C -1.7366
89 V C 0.0000
90 Q C -1.8980
91 D C -1.5000
92 D C 0.0000
93 F C -1.0257
94 V C 0.0000
95 E C 0.0000
96 I C 0.0000
97 H C -1.7605
98 G C 0.0000
99 K C -3.6868
100 H C -2.9953
101 N C -2.5104
102 E C -2.0655
103 R C -3.2535
104 Q C -3.4213
105 D C -3.8375
106 D C -3.6487
107 H C -2.7604
108 G C -1.7518
109 Y C -0.4214
110 I C -0.6553
111 S C -1.6850
112 R C -2.6777
113 E C -3.3518
114 F C -1.6952
115 H C -2.0728
116 R C -1.2951
117 R C -2.3678
118 Y C -0.8256
119 R C -0.4597
120 L C 0.0000
121 P C 0.0000
122 S C 0.2589
123 N C -0.3778
124 V C 0.0000
125 D C -0.5298
126 Q C 0.0000
127 S C -1.1681
128 A C -0.4366
129 L C 0.0000
130 S C -0.2844
131 C C 0.0000
132 S C -0.8204
133 L C 0.0000
134 S C -1.5397
135 A C -1.4670
136 D C -2.3111
137 G C 0.0000
138 M C -1.0143
139 L C 0.0000
140 T C 0.0000
141 F C 0.0000
142 C C -0.4676
143 G C 0.0000
144 P C -0.1724
145 K C 0.0785
146 I C 1.1597
147 Q C -0.8276
148 T C -0.9939
149 G C -0.2511
150 L C 0.4860
151 D C -0.2697
152 A C 0.2482
153 T C 0.2138
154 H C 0.0000
155 A C -0.7610
156 E C -2.3084
157 R C -2.5915
158 A C -1.3584
159 I C 0.0000
160 P C -0.2088
161 V C 0.3766
162 S C -0.7331
163 R C -2.2445
164 E C -2.0430
165 E C -2.6150
166 K C -1.6796
167 P C -0.9212
168 T C -0.5466
169 S C -0.4210
170 A C -0.6574
171 P C -0.6193
172 S C -0.8986
173 S C -0.4005
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Laboratory of Theory of Biopolymers 2018