| Chain sequence(s) |
A: SAVKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE
P: QPPVPPQRPM input PDB |
| Selected Chain(s) | A,P |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:46)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 5 | S | A | -1.4237 | |
| 6 | A | A | -1.1947 | |
| 7 | V | A | 0.0000 | |
| 8 | K | A | -1.3869 | |
| 9 | A | A | 0.0000 | |
| 10 | L | A | -1.0172 | |
| 11 | F | A | -1.6201 | |
| 12 | D | A | -2.6985 | |
| 13 | Y | A | 0.0000 | |
| 14 | K | A | -2.5555 | |
| 15 | A | A | -2.1756 | |
| 16 | Q | A | -2.6646 | |
| 17 | R | A | -2.9723 | |
| 18 | E | A | -2.7901 | |
| 19 | D | A | -2.0937 | |
| 20 | E | A | 0.0000 | |
| 21 | L | A | 0.0000 | |
| 22 | T | A | -1.2565 | |
| 23 | F | A | 0.0000 | |
| 24 | T | A | -1.7669 | |
| 25 | K | A | -2.1673 | |
| 26 | S | A | -1.1310 | |
| 27 | A | A | 0.0000 | |
| 28 | I | A | 0.3290 | |
| 29 | I | A | 0.0000 | |
| 30 | Q | A | -1.4263 | |
| 31 | N | A | -2.2481 | |
| 32 | V | A | -2.1944 | |
| 33 | E | A | -3.0742 | |
| 34 | K | A | -3.2619 | |
| 35 | Q | A | -3.2516 | |
| 36 | D | A | -2.8690 | |
| 37 | G | A | -1.9974 | |
| 38 | G | A | -1.5197 | |
| 39 | W | A | 0.0000 | |
| 40 | W | A | -1.7917 | |
| 41 | R | A | -2.0432 | |
| 42 | G | A | 0.0000 | |
| 43 | D | A | -1.7620 | |
| 44 | Y | A | -0.7922 | |
| 45 | G | A | -0.8920 | |
| 46 | G | A | -1.3648 | |
| 47 | K | A | -1.8706 | |
| 48 | K | A | -2.6140 | |
| 49 | Q | A | -1.9493 | |
| 50 | L | A | -1.2044 | |
| 51 | W | A | -0.8901 | |
| 52 | F | A | 0.0000 | |
| 53 | P | A | 0.0000 | |
| 54 | S | A | -1.1729 | |
| 55 | N | A | -0.5785 | |
| 56 | Y | A | 0.0000 | |
| 57 | V | A | 0.0000 | |
| 58 | E | A | -2.3717 | |
| 59 | E | A | -2.5432 | |
| 1 | Q | P | -1.0675 | |
| 2 | P | P | -0.6337 | |
| 3 | P | P | 0.2983 | |
| 4 | V | P | 1.1765 | |
| 5 | P | P | 0.1666 | |
| 6 | P | P | -0.5511 | |
| 7 | Q | P | -1.1119 | |
| 8 | R | P | -0.9561 | |
| 9 | P | P | -0.1705 | |
| 10 | M | P | 0.7438 |