Project name: 0210

Status: done

Started: 2025-02-10 02:36:10
Settings
Chain sequence(s) A: SAVKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE
P: QPPVPPQRPM
input PDB
Selected Chain(s) A,P
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:46)
Show buried residues

Minimal score value
-3.2619
Maximal score value
1.1765
Average score
-1.2058
Total score value
-78.3744

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
5 S A -1.4237
6 A A -1.1947
7 V A 0.0000
8 K A -1.3869
9 A A 0.0000
10 L A -1.0172
11 F A -1.6201
12 D A -2.6985
13 Y A 0.0000
14 K A -2.5555
15 A A -2.1756
16 Q A -2.6646
17 R A -2.9723
18 E A -2.7901
19 D A -2.0937
20 E A 0.0000
21 L A 0.0000
22 T A -1.2565
23 F A 0.0000
24 T A -1.7669
25 K A -2.1673
26 S A -1.1310
27 A A 0.0000
28 I A 0.3290
29 I A 0.0000
30 Q A -1.4263
31 N A -2.2481
32 V A -2.1944
33 E A -3.0742
34 K A -3.2619
35 Q A -3.2516
36 D A -2.8690
37 G A -1.9974
38 G A -1.5197
39 W A 0.0000
40 W A -1.7917
41 R A -2.0432
42 G A 0.0000
43 D A -1.7620
44 Y A -0.7922
45 G A -0.8920
46 G A -1.3648
47 K A -1.8706
48 K A -2.6140
49 Q A -1.9493
50 L A -1.2044
51 W A -0.8901
52 F A 0.0000
53 P A 0.0000
54 S A -1.1729
55 N A -0.5785
56 Y A 0.0000
57 V A 0.0000
58 E A -2.3717
59 E A -2.5432
1 Q P -1.0675
2 P P -0.6337
3 P P 0.2983
4 V P 1.1765
5 P P 0.1666
6 P P -0.5511
7 Q P -1.1119
8 R P -0.9561
9 P P -0.1705
10 M P 0.7438
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Laboratory of Theory of Biopolymers 2018