| Chain sequence(s) |
A: TPVLYDGRAPFNLTNADLNSNTGPYLTVVKGSENATHYSSLLGHSQLPTPLWNELLLLPHEQVVSISIDNSSVFVPGGGPPQFGFRRTEFIAANNGDHNDLNPILETGTTVFHVSIKQDPTRPLNFTHEYQIVFIEPNDGTHVFEIQLGSPFTNPTGSLPAPQAHSFKVRDHALNVLFETPFTPALWHNFAVQVDWTDRTLAVLYSTEAAPLAVVARPAPNLSASPGAAGQGDFHFGVLKLPLVNPNDTPADQGDVVHFGIQEGTTEALLYSGVFVEDASHGISVGYGLTIPALHSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:02)
[INFO] Main: Simulation completed successfully. (00:02:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | T | A | -0.1911 | |
| 2 | P | A | 0.1347 | |
| 3 | V | A | 0.8065 | |
| 4 | L | A | 0.8316 | |
| 5 | Y | A | 0.0000 | |
| 6 | D | A | -1.0926 | |
| 7 | G | A | 0.0000 | |
| 8 | R | A | -0.9809 | |
| 9 | A | A | 0.0000 | |
| 10 | P | A | -0.6712 | |
| 11 | F | A | -0.2770 | |
| 12 | N | A | -1.1169 | |
| 13 | L | A | 0.0000 | |
| 14 | T | A | -1.0345 | |
| 15 | N | A | -1.9502 | |
| 16 | A | A | -1.2353 | |
| 17 | D | A | -1.4582 | |
| 18 | L | A | 0.0000 | |
| 19 | N | A | -1.8229 | |
| 20 | S | A | -1.2573 | |
| 21 | N | A | -1.5117 | |
| 22 | T | A | -1.6654 | |
| 23 | G | A | -1.4843 | |
| 24 | P | A | -1.5442 | |
| 25 | Y | A | 0.0000 | |
| 26 | L | A | 0.0000 | |
| 27 | T | A | 0.0000 | |
| 28 | V | A | 0.8629 | |
| 29 | V | A | 0.0000 | |
| 30 | K | A | -0.1163 | |
| 31 | G | A | 0.0000 | |
| 32 | S | A | -0.7208 | |
| 33 | E | A | -2.0747 | |
| 34 | N | A | -2.3432 | |
| 35 | A | A | 0.0000 | |
| 36 | T | A | -1.5599 | |
| 37 | H | A | -1.8339 | |
| 38 | Y | A | 0.0000 | |
| 39 | S | A | 0.0000 | |
| 40 | S | A | -0.3680 | |
| 41 | L | A | -0.1397 | |
| 42 | L | A | 0.1128 | |
| 43 | G | A | -0.3679 | |
| 44 | H | A | -0.7770 | |
| 45 | S | A | -0.6036 | |
| 46 | Q | A | -0.3042 | |
| 47 | L | A | 0.9906 | |
| 48 | P | A | 0.0000 | |
| 49 | T | A | 0.0000 | |
| 50 | P | A | 0.6637 | |
| 51 | L | A | 0.0000 | |
| 52 | W | A | 0.2818 | |
| 53 | N | A | 0.0000 | |
| 54 | E | A | 0.1696 | |
| 55 | L | A | 2.2113 | |
| 56 | L | A | 2.7321 | |
| 57 | L | A | 2.6469 | |
| 58 | L | A | 1.6959 | |
| 59 | P | A | 0.5317 | |
| 60 | H | A | -0.9018 | |
| 61 | E | A | 0.0000 | |
| 62 | Q | A | 0.0000 | |
| 63 | V | A | 0.0000 | |
| 64 | V | A | 0.0000 | |
| 65 | S | A | 0.0000 | |
| 66 | I | A | 0.0000 | |
| 67 | S | A | 0.0000 | |
| 68 | I | A | 0.0000 | |
| 69 | D | A | -1.2922 | |
| 70 | N | A | -1.6133 | |
| 71 | S | A | -0.9148 | |
| 72 | S | A | 0.0000 | |
| 73 | V | A | 0.7024 | |
| 74 | F | A | 1.2437 | |
| 75 | V | A | 1.4429 | |
| 76 | P | A | 0.2877 | |
| 77 | G | A | -0.4779 | |
| 78 | G | A | -0.5354 | |
| 79 | G | A | -0.3238 | |
| 80 | P | A | 0.1211 | |
| 81 | P | A | 0.9320 | |
| 82 | Q | A | 0.0000 | |
| 83 | F | A | 2.2681 | |
| 84 | G | A | 0.0000 | |
| 85 | F | A | 0.0000 | |
| 86 | R | A | -0.0955 | |
| 87 | R | A | 0.0000 | |
| 88 | T | A | 0.0000 | |
| 89 | E | A | 0.0000 | |
| 90 | F | A | 0.0000 | |
| 91 | I | A | 0.0000 | |
| 92 | A | A | 0.0000 | |
| 93 | A | A | 0.0000 | |
| 94 | N | A | -3.1496 | |
| 95 | N | A | -2.6929 | |
| 96 | G | A | -2.1608 | |
| 97 | D | A | -3.4656 | |
| 98 | H | A | -2.8136 | |
| 99 | N | A | -2.8265 | |
| 100 | D | A | -2.7737 | |
| 101 | L | A | -1.4350 | |
| 102 | N | A | -0.9754 | |
| 103 | P | A | -0.3914 | |
| 104 | I | A | 0.6798 | |
| 105 | L | A | 0.0000 | |
| 106 | E | A | 0.0000 | |
| 107 | T | A | -0.0205 | |
| 108 | G | A | -0.4287 | |
| 109 | T | A | -0.6355 | |
| 110 | T | A | 0.0000 | |
| 111 | V | A | 0.0000 | |
| 112 | F | A | 0.0000 | |
| 113 | H | A | 0.0000 | |
| 114 | V | A | 0.0000 | |
| 115 | S | A | 0.0000 | |
| 116 | I | A | 0.0000 | |
| 117 | K | A | -0.2906 | |
| 118 | Q | A | 0.0000 | |
| 119 | D | A | 0.0000 | |
| 120 | P | A | -0.5766 | |
| 121 | T | A | -0.4847 | |
| 122 | R | A | -0.7467 | |
| 123 | P | A | -0.6592 | |
| 124 | L | A | 0.0000 | |
| 125 | N | A | -0.6127 | |
| 126 | F | A | -0.2695 | |
| 127 | T | A | 0.0332 | |
| 128 | H | A | 0.0000 | |
| 129 | E | A | 0.0000 | |
| 130 | Y | A | 0.0000 | |
| 131 | Q | A | -0.1558 | |
| 132 | I | A | 0.0000 | |
| 133 | V | A | 0.0000 | |
| 134 | F | A | 0.0000 | |
| 135 | I | A | 0.0000 | |
| 136 | E | A | -1.3440 | |
| 137 | P | A | 0.0000 | |
| 138 | N | A | -2.4397 | |
| 139 | D | A | -2.7248 | |
| 140 | G | A | -1.8917 | |
| 141 | T | A | -1.2424 | |
| 142 | H | A | -0.7178 | |
| 143 | V | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | E | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | Q | A | 0.0000 | |
| 148 | L | A | 0.0000 | |
| 149 | G | A | 0.0000 | |
| 150 | S | A | 0.0000 | |
| 151 | P | A | -0.0305 | |
| 152 | F | A | 0.0290 | |
| 153 | T | A | -0.6941 | |
| 154 | N | A | -1.5440 | |
| 155 | P | A | -1.2427 | |
| 156 | T | A | -0.7182 | |
| 157 | G | A | -0.6681 | |
| 158 | S | A | -0.2478 | |
| 159 | L | A | 0.2925 | |
| 160 | P | A | -0.3038 | |
| 161 | A | A | -0.5076 | |
| 162 | P | A | -0.9743 | |
| 163 | Q | A | -1.9668 | |
| 164 | A | A | 0.0000 | |
| 165 | H | A | -1.5487 | |
| 166 | S | A | 0.0000 | |
| 167 | F | A | 0.0000 | |
| 168 | K | A | 0.0000 | |
| 169 | V | A | 0.0000 | |
| 170 | R | A | 0.0000 | |
| 171 | D | A | 0.0000 | |
| 172 | H | A | 0.2473 | |
| 173 | A | A | 0.4445 | |
| 174 | L | A | 0.8107 | |
| 175 | N | A | -0.1261 | |
| 176 | V | A | 0.4761 | |
| 177 | L | A | 0.1534 | |
| 178 | F | A | -0.3773 | |
| 179 | E | A | -1.5637 | |
| 180 | T | A | -1.1735 | |
| 181 | P | A | -1.1708 | |
| 182 | F | A | 0.0000 | |
| 183 | T | A | -0.2835 | |
| 184 | P | A | -0.3526 | |
| 185 | A | A | -0.0161 | |
| 186 | L | A | 0.1845 | |
| 187 | W | A | 0.0000 | |
| 188 | H | A | 0.0000 | |
| 189 | N | A | 0.0000 | |
| 190 | F | A | 0.0000 | |
| 191 | A | A | 0.0000 | |
| 192 | V | A | 0.0000 | |
| 193 | Q | A | 0.0000 | |
| 194 | V | A | 0.0000 | |
| 195 | D | A | -0.9657 | |
| 196 | W | A | -0.8409 | |
| 197 | T | A | -1.1453 | |
| 198 | D | A | -1.8000 | |
| 199 | R | A | -0.9872 | |
| 200 | T | A | 0.0000 | |
| 201 | L | A | 0.0000 | |
| 202 | A | A | 0.0000 | |
| 203 | V | A | 0.0000 | |
| 204 | L | A | 0.0000 | |
| 205 | Y | A | 0.4871 | |
| 206 | S | A | 0.0000 | |
| 207 | T | A | -0.2181 | |
| 208 | E | A | -0.5531 | |
| 209 | A | A | 0.0185 | |
| 210 | A | A | -0.1495 | |
| 211 | P | A | 0.0517 | |
| 212 | L | A | 0.0000 | |
| 213 | A | A | 0.5749 | |
| 214 | V | A | 0.5793 | |
| 215 | V | A | 0.4851 | |
| 216 | A | A | -0.3207 | |
| 217 | R | A | -1.7034 | |
| 218 | P | A | -1.2465 | |
| 219 | A | A | -0.7708 | |
| 220 | P | A | -0.4131 | |
| 221 | N | A | 0.0000 | |
| 222 | L | A | 0.9511 | |
| 223 | S | A | 0.5060 | |
| 224 | A | A | 0.0000 | |
| 225 | S | A | -0.3377 | |
| 226 | P | A | -0.5905 | |
| 227 | G | A | -0.6696 | |
| 228 | A | A | -0.4496 | |
| 229 | A | A | -0.7134 | |
| 230 | G | A | 0.0000 | |
| 231 | Q | A | -0.5810 | |
| 232 | G | A | 0.0000 | |
| 233 | D | A | -0.8808 | |
| 234 | F | A | 0.0000 | |
| 235 | H | A | 0.0000 | |
| 236 | F | A | 0.0000 | |
| 237 | G | A | 0.0000 | |
| 238 | V | A | 0.0000 | |
| 239 | L | A | 0.0000 | |
| 240 | K | A | 0.0000 | |
| 241 | L | A | 0.0000 | |
| 242 | P | A | 0.0000 | |
| 243 | L | A | 0.1816 | |
| 244 | V | A | 0.0000 | |
| 245 | N | A | -0.8380 | |
| 246 | P | A | -1.2642 | |
| 247 | N | A | -1.7647 | |
| 248 | D | A | -1.2579 | |
| 249 | T | A | -0.9314 | |
| 250 | P | A | -1.0965 | |
| 251 | A | A | -0.5867 | |
| 252 | D | A | -0.9779 | |
| 253 | Q | A | -1.2221 | |
| 254 | G | A | -1.1257 | |
| 255 | D | A | -0.6684 | |
| 256 | V | A | 0.4142 | |
| 257 | V | A | 0.7307 | |
| 258 | H | A | 0.7507 | |
| 259 | F | A | 0.9097 | |
| 260 | G | A | 0.4371 | |
| 261 | I | A | 0.7660 | |
| 262 | Q | A | -0.3182 | |
| 263 | E | A | -1.4383 | |
| 264 | G | A | -1.4402 | |
| 265 | T | A | -1.1097 | |
| 266 | T | A | -0.8732 | |
| 267 | E | A | 0.0000 | |
| 268 | A | A | 0.0000 | |
| 269 | L | A | 0.0000 | |
| 270 | L | A | 0.0000 | |
| 271 | Y | A | 0.0000 | |
| 272 | S | A | 0.0000 | |
| 273 | G | A | 0.0000 | |
| 274 | V | A | 0.0000 | |
| 275 | F | A | 0.0000 | |
| 276 | V | A | 0.0000 | |
| 277 | E | A | 0.0000 | |
| 278 | D | A | -0.2592 | |
| 279 | A | A | 0.0000 | |
| 280 | S | A | -0.8944 | |
| 281 | H | A | -1.2037 | |
| 282 | G | A | 0.0000 | |
| 283 | I | A | 0.0000 | |
| 284 | S | A | 0.2209 | |
| 285 | V | A | 0.0000 | |
| 286 | G | A | 0.0000 | |
| 287 | Y | A | 0.7799 | |
| 288 | G | A | 0.3368 | |
| 289 | L | A | 1.0611 | |
| 290 | T | A | 0.4418 | |
| 291 | I | A | 0.5350 | |
| 292 | P | A | -0.3401 | |
| 293 | A | A | -0.4597 | |
| 294 | L | A | -0.6935 | |
| 295 | H | A | -1.5471 | |
| 296 | S | A | -1.2408 | |
| 297 | S | A | -0.7228 |