| Chain sequence(s) |
A: TTVHQQTHQDQTCPDGYTRTNYYCRRDGCGSWCNGAERQQPCIRGPCCCDLTYRTAYEYHVDTW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:49)
[INFO] Main: Simulation completed successfully. (00:00:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | T | A | 0.2251 | |
| 2 | T | A | 0.3635 | |
| 3 | V | A | 0.6910 | |
| 4 | H | A | -1.0313 | |
| 5 | Q | A | -1.8800 | |
| 6 | Q | A | -2.4279 | |
| 7 | T | A | -1.9064 | |
| 8 | H | A | -2.7237 | |
| 9 | Q | A | -2.7756 | |
| 10 | D | A | -2.7357 | |
| 11 | Q | A | -2.4873 | |
| 12 | T | A | -1.5235 | |
| 13 | C | A | 0.0000 | |
| 14 | P | A | -1.5910 | |
| 15 | D | A | -1.9962 | |
| 16 | G | A | -0.6692 | |
| 17 | Y | A | -0.7048 | |
| 18 | T | A | -1.2788 | |
| 19 | R | A | -1.8329 | |
| 20 | T | A | -1.1494 | |
| 21 | N | A | -1.8154 | |
| 22 | Y | A | -1.4204 | |
| 23 | Y | A | -1.2013 | |
| 24 | C | A | 0.0000 | |
| 25 | R | A | -3.9836 | |
| 26 | R | A | -5.5270 | |
| 27 | D | A | -4.6030 | |
| 28 | G | A | -2.2448 | |
| 29 | C | A | 0.0000 | |
| 30 | G | A | -0.6753 | |
| 31 | S | A | -0.2127 | |
| 32 | W | A | 0.1986 | |
| 33 | C | A | 0.0000 | |
| 34 | N | A | -1.0328 | |
| 35 | G | A | -2.4908 | |
| 36 | A | A | -3.5374 | |
| 37 | E | A | -5.2201 | |
| 38 | R | A | -5.0546 | |
| 39 | Q | A | -4.1025 | |
| 40 | Q | A | -2.9104 | |
| 41 | P | A | -2.0667 | |
| 42 | C | A | -0.5732 | |
| 43 | I | A | 0.8423 | |
| 44 | R | A | -1.0979 | |
| 45 | G | A | -0.6603 | |
| 46 | P | A | -0.8622 | |
| 47 | C | A | 0.0000 | |
| 48 | C | A | 0.0000 | |
| 49 | C | A | 0.0000 | |
| 50 | D | A | -0.5221 | |
| 51 | L | A | 0.8285 | |
| 52 | T | A | 0.1555 | |
| 53 | Y | A | 0.0989 | |
| 54 | R | A | -1.1201 | |
| 55 | T | A | -0.5822 | |
| 56 | A | A | -0.0158 | |
| 57 | Y | A | 0.3869 | |
| 58 | E | A | -0.4714 | |
| 59 | Y | A | 0.5441 | |
| 60 | H | A | -0.3269 | |
| 61 | V | A | 0.6103 | |
| 62 | D | A | -0.7116 | |
| 63 | T | A | -0.0019 | |
| 64 | W | A | 0.8490 |