Project name: 7AP7

Status: done

Started: 2024-11-21 06:04:00
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Chain sequence(s) A: KVFERCELARRTLKRLGMMDGYRRGISLANWMCCLAKWESGYNTRATNYNAGDRSTDYGIFQIINSRYRCNDGKTPGAVNACHHLSCSALLQDNIADAVACAKRVVRDPQGIRRAWVAWRNRCCQNRDVRQYVQGCGV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:59)
Show buried residues

Minimal score value
-4.2589
Maximal score value
1.2409
Average score
-1.0682
Total score value
-138.8646

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -2.2290
2 V A -0.2870
3 F A 0.0000
4 E A -2.1650
5 R A -1.8550
6 C A -1.5821
7 E A -1.9617
8 L A 0.0000
9 A A 0.0000
10 R A -2.2319
11 T A -1.7767
12 L A 0.0000
13 K A -2.5376
14 R A -2.5691
15 L A -1.2653
16 G A -1.4126
17 M A 0.0000
18 D A -2.2365
19 G A -1.7906
20 Y A -1.7517
21 R A -2.6617
22 G A -1.6872
23 I A 0.0000
24 S A -1.2772
25 L A 0.0000
26 A A 0.0000
27 N A -1.2413
28 W A 0.0000
29 M A 0.0000
30 C A 0.0000
31 L A 0.0000
32 A A 0.0000
33 K A -0.8636
34 W A -0.3298
35 E A -0.5883
36 S A -0.5791
37 G A -0.4218
38 Y A -0.7226
39 N A -1.2790
40 T A 0.0000
41 R A -2.3788
42 A A -1.2442
43 T A -0.7843
44 N A -0.4083
45 Y A 0.1665
46 N A -0.8204
47 A A -0.9083
48 G A -1.2392
49 D A -1.8927
50 R A -2.5049
51 S A 0.0000
52 T A 0.0000
53 D A -0.5044
54 Y A 0.0000
55 G A 0.0000
56 I A 0.0000
57 F A 0.0000
58 Q A -0.6558
59 I A 0.0000
60 N A -0.4068
61 S A 0.0000
62 R A -0.6474
63 Y A 1.1235
64 R A -0.2424
65 C A 0.0000
66 N A -1.7643
67 D A -1.9339
68 G A -1.9051
69 K A -2.6504
70 T A 0.0000
71 P A -1.3028
72 G A -0.5340
73 A A 0.0222
74 V A 1.2409
75 N A -0.4260
76 A A -0.3157
77 C A -0.8525
78 H A -1.2904
79 L A -0.9785
80 S A -1.0829
81 C A 0.0000
82 S A -0.6994
83 A A -0.8524
84 L A 0.0000
85 L A -1.7387
86 Q A -2.6504
87 D A -3.2556
88 N A -2.6579
89 I A 0.0000
90 A A -0.9073
91 D A -0.9714
92 A A 0.0000
93 V A 0.0000
94 A A -0.5826
95 C A 0.0000
96 A A 0.0000
97 K A -1.9613
98 R A -2.6040
99 V A 0.0000
100 V A 0.0000
101 R A -3.8218
102 D A -3.5169
103 P A -2.1446
104 Q A -2.1315
105 G A -2.5443
106 I A 0.0000
107 R A -1.7794
108 A A -0.9795
109 W A 0.0000
110 V A 0.5493
111 A A -0.5938
112 W A 0.0000
113 R A -2.7467
114 N A -2.7927
115 R A -2.7193
116 C A 0.0000
117 Q A -3.3064
118 N A -3.3300
119 R A -4.2589
120 D A -3.8075
121 V A 0.0000
122 R A -3.4675
123 Q A -2.7459
124 Y A -1.7581
125 V A -1.4056
126 Q A -2.1647
127 G A -1.3395
128 C A 0.0000
129 G A -0.4816
130 V A -0.2720
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Laboratory of Theory of Biopolymers 2018