Project name: 23_x4e7_x11e6_i20e6_i14e7

Status: done

Started: 2025-08-11 19:24:11
Settings
Chain sequence(s) A: GPGPGLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPGVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAY
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:12)
Show buried residues

Minimal score value
-4.2758
Maximal score value
3.4295
Average score
-0.3432
Total score value
-89.9176

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.7314
2 P A -0.8375
3 G A -0.7745
4 P A -0.2317
5 G A 0.5226
6 L A 2.0337
7 L A 1.9844
8 C A 0.6955
9 H A -1.0295
10 E A -2.0448
11 Q A -1.7743
12 L A -0.3395
13 S A -1.0940
14 D A -2.3749
15 S A -2.4675
16 E A -3.9040
17 E A -4.1570
18 E A -4.2758
19 N A -3.7848
20 D A -3.1538
21 G A -2.1111
22 P A -1.2442
23 G A -1.3397
24 P A -1.2077
25 G A -1.4029
26 Q A -1.8178
27 S A -1.0822
28 T A -0.8876
29 H A -0.7301
30 V A 0.4518
31 D A -0.8237
32 I A 0.4141
33 R A -1.5642
34 T A -1.1577
35 L A -0.4663
36 E A -2.0203
37 D A -1.6920
38 L A 0.2387
39 L A 0.9427
40 M A 1.0041
41 G A 0.2159
42 P A -0.2527
43 G A -0.6221
44 P A -0.8232
45 G A -1.0519
46 T A -1.1046
47 P A -0.6904
48 T A -0.7691
49 L A -0.5888
50 H A -1.0233
51 E A -0.5131
52 Y A 0.3738
53 M A 0.1457
54 L A -0.2888
55 D A -1.3054
56 L A -0.2333
57 Q A -1.3039
58 P A -0.5660
59 E A -0.5361
60 T A -0.2860
61 G A -0.0975
62 P A 0.0000
63 G A -0.7951
64 P A -1.0173
65 G A -1.5325
66 L A 0.0000
67 Q A -1.9918
68 D A -2.0246
69 I A 0.0000
70 V A -1.0008
71 L A 0.0000
72 H A -0.8684
73 L A 0.0000
74 E A -2.5925
75 P A -2.8893
76 Q A -3.0881
77 N A -2.4177
78 E A -1.9663
79 I A 0.0000
80 P A -0.9650
81 G A -0.7980
82 P A 0.0000
83 G A -0.7666
84 P A -1.0126
85 G A -1.6081
86 A A 0.0000
87 E A -3.1932
88 K A -3.2226
89 L A 0.0000
90 R A -2.2246
91 H A 0.0000
92 L A -0.5493
93 N A 0.0000
94 E A -3.1477
95 K A 0.0000
96 R A -4.1764
97 R A -3.5909
98 F A -1.6558
99 H A -1.5265
100 N A -1.5804
101 G A 0.0000
102 P A 0.0000
103 G A -0.7343
104 P A -0.9174
105 G A -1.4980
106 L A 0.0000
107 D A -2.5220
108 K A -3.2010
109 K A 0.0000
110 Q A -2.1032
111 R A 0.0000
112 F A -0.8236
113 H A 0.0000
114 N A -1.6041
115 I A 0.0000
116 R A -4.2530
117 G A -3.8500
118 R A -3.3836
119 W A 0.0000
120 T A -0.5344
121 G A 0.0000
122 P A 0.0000
123 G A -0.4974
124 P A -0.7926
125 G A -1.1263
126 N A 0.0000
127 P A -1.1032
128 A A -1.8600
129 E A -2.0366
130 K A -2.7523
131 L A 0.0000
132 R A -1.9316
133 H A 0.0000
134 L A -0.2653
135 N A 0.0000
136 E A -2.5521
137 K A -2.7934
138 R A -2.8815
139 R A -0.8146
140 F A 0.9132
141 G A 0.0000
142 P A -0.1401
143 G A 0.0000
144 P A -0.7731
145 G A -0.5800
146 S A 0.0000
147 K A -1.3760
148 I A -0.8421
149 S A -1.3925
150 E A -2.5597
151 Y A -1.9275
152 R A -2.3937
153 H A -0.3451
154 Y A 0.9833
155 C A 0.0000
156 Y A 1.0710
157 S A 0.4596
158 L A 0.9127
159 Y A 0.6914
160 G A 0.1688
161 G A 0.1923
162 P A -0.0873
163 G A -0.6720
164 P A -0.4824
165 G A -0.4585
166 V A 0.3058
167 Y A 0.4380
168 D A -0.9720
169 F A 0.0266
170 A A -0.1868
171 F A 0.5464
172 R A -1.1824
173 D A -1.1908
174 L A 0.0971
175 A A -0.1513
176 A A -0.2911
177 Y A -0.0198
178 R A -0.3081
179 F A -0.2385
180 H A -0.9437
181 N A -1.1264
182 I A -0.0662
183 A A -0.3136
184 G A -0.8639
185 H A -0.3289
186 Y A 1.0433
187 A A 0.8950
188 A A 1.2595
189 Y A 2.2706
190 C A 2.5696
191 Y A 2.5320
192 S A 1.9434
193 L A 2.3150
194 Y A 1.8686
195 G A 0.5968
196 T A 0.7321
197 T A 0.5844
198 L A 1.3220
199 A A 0.8063
200 A A 1.0836
201 Y A 1.7149
202 K A -0.0858
203 T A 0.6724
204 V A 1.8803
205 L A 0.8261
206 E A -0.8189
207 L A 1.1802
208 T A 0.1759
209 E A -1.1708
210 V A 0.1157
211 A A -0.1847
212 A A -0.7216
213 Y A 0.0861
214 Y A -0.3934
215 R A -1.4361
216 A A -0.7024
217 H A -0.9302
218 Y A 0.0533
219 N A 0.0746
220 I A 2.0128
221 V A 2.5766
222 T A 1.4171
223 F A 1.1808
224 A A 1.4468
225 A A 1.1640
226 Y A 1.0368
227 T A 1.2626
228 L A 2.1242
229 Q A 0.8831
230 D A 1.2766
231 I A 2.9936
232 V A 3.2388
233 L A 2.3573
234 H A 1.8824
235 L A 3.0651
236 A A 2.7246
237 A A 2.5446
238 Y A 3.3268
239 L A 3.4295
240 L A 3.4141
241 M A 3.2254
242 G A 2.4589
243 T A 2.7016
244 L A 3.3954
245 G A 2.3278
246 I A 3.3606
247 V A 3.0721
248 A A 2.0562
249 A A 2.0081
250 Y A 2.0617
251 L A 1.0404
252 P A -0.4232
253 A A -1.0596
254 R A -2.6357
255 R A -3.0099
256 A A -2.4611
257 E A -3.1210
258 P A -1.9286
259 Q A -1.5725
260 A A -0.5618
261 A A 0.4274
262 Y A 1.2008
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Laboratory of Theory of Biopolymers 2018