| Chain sequence(s) |
A: MGSSHHHHHHSSGENLYFQGAMAVERNSGDLQLPQEIAMLVPNKTQVVPKSGGEGKVKDIFASPALVRAGGVMIAFVEGRTKNKLFPEVIDLSSSDIVAGYIKAPETWQSLVAEVTKEYWQAHTVLESANNSNHRVGVARLPTGITRGNKVFLLVGSYEERREIDDYIWKAEAWNIKVIEGEATQSTEVQPTQPINWSEPKPLFQTDSPNNKGDLKEFLGGGGSGIVMGNGTLVFPLTAKDESNKVFSLITYSTDDGQKWEIPGGVSSVACRSPRVTEWEEGTLLMVTYCEDGRKVFESRDMGKTWTEARGTLPGVWLKSGPELPEVSLRVDALITATIEGRKVMLYTQKVRHFLEVDEPNALHLWVTDNNRTFHLGPFSVDCAENKTFANTLLYSDDALHLLQAKGDHESTAVSLARLTEELNTI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:03)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:03)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:03)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:03)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:59)
[INFO] Main: Simulation completed successfully. (00:05:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7717 | |
| 2 | G | A | -0.2052 | |
| 3 | S | A | -0.6310 | |
| 4 | S | A | -1.2521 | |
| 5 | H | A | -2.0381 | |
| 6 | H | A | -2.3793 | |
| 7 | H | A | -2.6034 | |
| 8 | H | A | -2.6068 | |
| 9 | H | A | -2.3998 | |
| 10 | H | A | -2.0799 | |
| 11 | S | A | -1.5613 | |
| 12 | S | A | -1.6354 | |
| 13 | G | A | -1.8084 | |
| 14 | E | A | -2.1401 | |
| 15 | N | A | -0.9166 | |
| 16 | L | A | 1.3055 | |
| 17 | Y | A | 1.9494 | |
| 18 | F | A | 2.1744 | |
| 19 | Q | A | 0.3311 | |
| 20 | G | A | -0.0469 | |
| 21 | A | A | 0.5267 | |
| 22 | M | A | 1.1477 | |
| 23 | A | A | 0.3859 | |
| 24 | V | A | 0.5649 | |
| 25 | E | A | -1.9914 | |
| 26 | R | A | -3.1200 | |
| 27 | N | A | -2.8851 | |
| 28 | S | A | -1.8173 | |
| 29 | G | A | -1.7190 | |
| 30 | D | A | -1.8164 | |
| 31 | L | A | 0.1121 | |
| 32 | Q | A | -1.3770 | |
| 33 | L | A | -0.3078 | |
| 34 | P | A | 0.0000 | |
| 35 | Q | A | -1.9670 | |
| 36 | E | A | -1.9764 | |
| 37 | I | A | 0.0000 | |
| 38 | A | A | -0.2480 | |
| 39 | M | A | 0.0000 | |
| 40 | L | A | 0.0000 | |
| 41 | V | A | -0.3934 | |
| 42 | P | A | -1.1898 | |
| 43 | N | A | -2.0458 | |
| 44 | K | A | -2.4087 | |
| 45 | T | A | 0.0000 | |
| 46 | Q | A | -1.9883 | |
| 47 | V | A | 0.0000 | |
| 48 | V | A | -1.4881 | |
| 49 | P | A | -1.8043 | |
| 50 | K | A | -1.5453 | |
| 51 | S | A | -1.3116 | |
| 52 | G | A | -1.4258 | |
| 53 | G | A | -1.9969 | |
| 54 | E | A | -2.7869 | |
| 55 | G | A | -2.3642 | |
| 56 | K | A | -2.4638 | |
| 57 | V | A | -1.0707 | |
| 58 | K | A | 0.0000 | |
| 59 | D | A | -1.0358 | |
| 60 | I | A | -0.7791 | |
| 61 | F | A | 0.0000 | |
| 62 | A | A | -0.0129 | |
| 63 | S | A | 0.0224 | |
| 64 | P | A | 0.0000 | |
| 65 | A | A | 0.0000 | |
| 66 | L | A | 0.0000 | |
| 67 | V | A | 0.0000 | |
| 68 | R | A | -0.9684 | |
| 69 | A | A | 0.0000 | |
| 70 | G | A | -1.6177 | |
| 71 | G | A | -1.3137 | |
| 72 | V | A | 0.0000 | |
| 73 | M | A | 0.0000 | |
| 74 | I | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | F | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | E | A | 0.0000 | |
| 79 | G | A | 0.0000 | |
| 80 | R | A | -0.5627 | |
| 81 | T | A | -0.8603 | |
| 82 | K | A | -1.3166 | |
| 83 | N | A | -1.4405 | |
| 84 | K | A | -1.5070 | |
| 85 | L | A | -0.1404 | |
| 86 | F | A | 0.0000 | |
| 87 | P | A | -1.0748 | |
| 88 | E | A | -1.4115 | |
| 89 | V | A | 0.3568 | |
| 90 | I | A | 0.6291 | |
| 91 | D | A | -1.5237 | |
| 92 | L | A | 0.0000 | |
| 93 | S | A | 0.0000 | |
| 94 | S | A | 0.0000 | |
| 95 | S | A | 0.0000 | |
| 96 | D | A | -0.9414 | |
| 97 | I | A | 0.0000 | |
| 98 | V | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | G | A | 0.0000 | |
| 101 | Y | A | 0.0000 | |
| 102 | I | A | 0.0000 | |
| 103 | K | A | -0.9871 | |
| 104 | A | A | -0.8835 | |
| 105 | P | A | -1.1926 | |
| 106 | E | A | -2.3165 | |
| 107 | T | A | -1.2655 | |
| 108 | W | A | -1.1388 | |
| 109 | Q | A | -1.2856 | |
| 110 | S | A | -0.9981 | |
| 111 | L | A | 0.0000 | |
| 112 | V | A | -0.2635 | |
| 113 | A | A | -0.4901 | |
| 114 | E | A | 0.0000 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | -0.6141 | |
| 117 | K | A | -1.2427 | |
| 118 | E | A | -1.6116 | |
| 119 | Y | A | -0.0804 | |
| 120 | W | A | -0.4735 | |
| 121 | Q | A | -0.7941 | |
| 122 | A | A | 0.0000 | |
| 123 | H | A | 0.0000 | |
| 124 | T | A | 0.0000 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | 0.0000 | |
| 127 | E | A | -2.0006 | |
| 128 | S | A | -1.4205 | |
| 129 | A | A | -1.4464 | |
| 130 | N | A | -2.6047 | |
| 131 | N | A | -2.7063 | |
| 132 | S | A | -2.4405 | |
| 133 | N | A | -2.2373 | |
| 134 | H | A | -2.1884 | |
| 135 | R | A | -3.2270 | |
| 136 | V | A | 0.0000 | |
| 137 | G | A | 0.0000 | |
| 138 | V | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | R | A | -0.3569 | |
| 141 | L | A | 0.0226 | |
| 142 | P | A | 0.0000 | |
| 143 | T | A | 0.0000 | |
| 144 | G | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | T | A | -0.9900 | |
| 147 | R | A | -1.6407 | |
| 148 | G | A | -1.6291 | |
| 149 | N | A | -1.9471 | |
| 150 | K | A | -2.2170 | |
| 151 | V | A | 0.0000 | |
| 152 | F | A | 0.0000 | |
| 153 | L | A | 0.0000 | |
| 154 | L | A | 0.0000 | |
| 155 | V | A | 0.0000 | |
| 156 | G | A | 0.0000 | |
| 157 | S | A | -0.7858 | |
| 158 | Y | A | -1.1233 | |
| 159 | E | A | -2.2385 | |
| 160 | E | A | -2.6820 | |
| 161 | R | A | -3.0920 | |
| 162 | R | A | -1.7320 | |
| 163 | E | A | -1.2039 | |
| 164 | I | A | 0.2482 | |
| 165 | D | A | -1.5404 | |
| 166 | D | A | -1.4127 | |
| 167 | Y | A | 0.6114 | |
| 168 | I | A | 0.2686 | |
| 169 | W | A | -0.9504 | |
| 170 | K | A | -2.2938 | |
| 171 | A | A | -2.1557 | |
| 172 | E | A | -2.6845 | |
| 173 | A | A | -1.6267 | |
| 174 | W | A | -1.2974 | |
| 175 | N | A | -1.8055 | |
| 176 | I | A | 0.0000 | |
| 177 | K | A | -1.2376 | |
| 178 | V | A | 0.0000 | |
| 179 | I | A | 0.0000 | |
| 180 | E | A | -1.5454 | |
| 181 | G | A | 0.0000 | |
| 182 | E | A | -2.3825 | |
| 183 | A | A | 0.0000 | |
| 184 | T | A | -1.7587 | |
| 185 | Q | A | -1.8382 | |
| 186 | S | A | -1.2630 | |
| 187 | T | A | -0.9998 | |
| 188 | E | A | -1.5777 | |
| 189 | V | A | 0.3822 | |
| 190 | Q | A | -0.9753 | |
| 191 | P | A | -1.0039 | |
| 192 | T | A | -0.4903 | |
| 193 | Q | A | -0.9514 | |
| 194 | P | A | 0.0000 | |
| 195 | I | A | 0.0000 | |
| 196 | N | A | -1.8304 | |
| 197 | W | A | -1.4491 | |
| 198 | S | A | -1.6264 | |
| 199 | E | A | -2.2510 | |
| 200 | P | A | -1.7019 | |
| 201 | K | A | -1.9614 | |
| 202 | P | A | -1.5527 | |
| 203 | L | A | 0.0000 | |
| 204 | F | A | -1.7749 | |
| 205 | Q | A | -2.3468 | |
| 206 | T | A | -1.6369 | |
| 207 | D | A | -2.5632 | |
| 208 | S | A | -2.3342 | |
| 209 | P | A | -2.1063 | |
| 210 | N | A | -2.8364 | |
| 211 | N | A | -3.7432 | |
| 212 | K | A | -3.2331 | |
| 213 | G | A | -3.1393 | |
| 214 | D | A | -3.7512 | |
| 215 | L | A | -3.0831 | |
| 216 | K | A | -3.3493 | |
| 217 | E | A | -2.1382 | |
| 218 | F | A | 0.0000 | |
| 219 | L | A | 0.0000 | |
| 220 | G | A | 0.0000 | |
| 221 | G | A | 0.0000 | |
| 222 | G | A | 0.0000 | |
| 223 | G | A | 0.0000 | |
| 224 | S | A | 0.1228 | |
| 225 | G | A | 0.0000 | |
| 226 | I | A | 0.3405 | |
| 227 | V | A | 0.1770 | |
| 228 | M | A | 0.0000 | |
| 229 | G | A | -1.5619 | |
| 230 | N | A | -1.7702 | |
| 231 | G | A | -0.9952 | |
| 232 | T | A | 0.0000 | |
| 233 | L | A | 0.0000 | |
| 234 | V | A | 0.0000 | |
| 235 | F | A | 0.0000 | |
| 236 | P | A | 0.0000 | |
| 237 | L | A | 0.0000 | |
| 238 | T | A | 0.0000 | |
| 239 | A | A | 0.0000 | |
| 240 | K | A | -2.1328 | |
| 241 | D | A | -3.1782 | |
| 242 | E | A | -3.6338 | |
| 243 | S | A | -2.5650 | |
| 244 | N | A | -3.0000 | |
| 245 | K | A | -1.9916 | |
| 246 | V | A | 0.0000 | |
| 247 | F | A | -0.1447 | |
| 248 | S | A | 0.0000 | |
| 249 | L | A | 0.0000 | |
| 250 | I | A | 0.0000 | |
| 251 | T | A | 0.0000 | |
| 252 | Y | A | -0.3585 | |
| 253 | S | A | 0.0000 | |
| 254 | T | A | -1.2661 | |
| 255 | D | A | -1.5867 | |
| 256 | D | A | -1.7442 | |
| 257 | G | A | 0.0000 | |
| 258 | Q | A | -2.4112 | |
| 259 | K | A | -2.8172 | |
| 260 | W | A | 0.0000 | |
| 261 | E | A | -1.5550 | |
| 262 | I | A | -1.0587 | |
| 263 | P | A | 0.0000 | |
| 264 | G | A | -1.6322 | |
| 265 | G | A | 0.0000 | |
| 266 | V | A | 0.4991 | |
| 267 | S | A | 0.0000 | |
| 268 | S | A | 0.0053 | |
| 269 | V | A | 0.5933 | |
| 270 | A | A | -0.9108 | |
| 271 | C | A | 0.0000 | |
| 272 | R | A | -1.8329 | |
| 273 | S | A | -0.9251 | |
| 274 | P | A | 0.0000 | |
| 275 | R | A | -0.3715 | |
| 276 | V | A | 0.0000 | |
| 277 | T | A | 0.0000 | |
| 278 | E | A | -0.8172 | |
| 279 | W | A | -1.2700 | |
| 280 | E | A | -2.5439 | |
| 281 | E | A | -3.0685 | |
| 282 | G | A | -2.3075 | |
| 283 | T | A | 0.0000 | |
| 284 | L | A | 0.0000 | |
| 285 | L | A | 0.0000 | |
| 286 | M | A | 0.0000 | |
| 287 | V | A | 0.0000 | |
| 288 | T | A | 0.0000 | |
| 289 | Y | A | -1.4174 | |
| 290 | C | A | 0.0000 | |
| 291 | E | A | -3.2107 | |
| 292 | D | A | -3.2043 | |
| 293 | G | A | 0.0000 | |
| 294 | R | A | 0.0000 | |
| 295 | K | A | -1.5880 | |
| 296 | V | A | 0.0000 | |
| 297 | F | A | 0.0000 | |
| 298 | E | A | -1.4857 | |
| 299 | S | A | 0.0000 | |
| 300 | R | A | -2.8103 | |
| 301 | D | A | -1.8984 | |
| 302 | M | A | -1.1340 | |
| 303 | G | A | 0.0000 | |
| 304 | K | A | -2.1020 | |
| 305 | T | A | -1.2914 | |
| 306 | W | A | -1.0816 | |
| 307 | T | A | -1.4249 | |
| 308 | E | A | -2.5769 | |
| 309 | A | A | -2.0893 | |
| 310 | R | A | -2.7097 | |
| 311 | G | A | -1.8857 | |
| 312 | T | A | -1.5208 | |
| 313 | L | A | 0.0000 | |
| 314 | P | A | -1.1961 | |
| 315 | G | A | -0.1920 | |
| 316 | V | A | 0.0000 | |
| 317 | W | A | -0.6215 | |
| 318 | L | A | -0.7780 | |
| 319 | K | A | -2.3141 | |
| 320 | S | A | -2.3188 | |
| 321 | G | A | -1.6350 | |
| 322 | P | A | -1.3416 | |
| 323 | E | A | -2.1044 | |
| 324 | L | A | -1.1094 | |
| 325 | P | A | -1.1066 | |
| 326 | E | A | -1.7429 | |
| 327 | V | A | 0.2851 | |
| 328 | S | A | 0.0000 | |
| 329 | L | A | 0.0000 | |
| 330 | R | A | -0.5531 | |
| 331 | V | A | 0.0000 | |
| 332 | D | A | 0.0000 | |
| 333 | A | A | 0.0000 | |
| 334 | L | A | 0.0000 | |
| 335 | I | A | 0.2486 | |
| 336 | T | A | -0.0302 | |
| 337 | A | A | 0.0000 | |
| 338 | T | A | -1.7329 | |
| 339 | I | A | -2.0197 | |
| 340 | E | A | -2.9210 | |
| 341 | G | A | -2.3951 | |
| 342 | R | A | -2.9896 | |
| 343 | K | A | -2.1897 | |
| 344 | V | A | 0.0000 | |
| 345 | M | A | 0.0000 | |
| 346 | L | A | 0.0000 | |
| 347 | Y | A | 0.0000 | |
| 348 | T | A | 0.0000 | |
| 349 | Q | A | 0.0000 | |
| 350 | K | A | -0.1528 | |
| 351 | V | A | -0.0401 | |
| 352 | R | A | -0.5788 | |
| 353 | H | A | -0.5932 | |
| 354 | F | A | 1.5815 | |
| 355 | L | A | 1.2318 | |
| 356 | E | A | -0.9636 | |
| 357 | V | A | 0.3010 | |
| 358 | D | A | -1.8175 | |
| 359 | E | A | -1.7924 | |
| 360 | P | A | -1.1521 | |
| 361 | N | A | -0.8547 | |
| 362 | A | A | -0.1885 | |
| 363 | L | A | 0.0000 | |
| 364 | H | A | -0.1319 | |
| 365 | L | A | 0.0000 | |
| 366 | W | A | 0.0564 | |
| 367 | V | A | 0.0000 | |
| 368 | T | A | 0.0000 | |
| 369 | D | A | -1.7213 | |
| 370 | N | A | -1.8364 | |
| 371 | N | A | -2.5544 | |
| 372 | R | A | -2.4964 | |
| 373 | T | A | -1.1172 | |
| 374 | F | A | 0.2285 | |
| 375 | H | A | -0.1785 | |
| 376 | L | A | -0.0216 | |
| 377 | G | A | 0.0328 | |
| 378 | P | A | 0.2407 | |
| 379 | F | A | 0.0000 | |
| 380 | S | A | 0.0000 | |
| 381 | V | A | 0.5848 | |
| 382 | D | A | -0.5477 | |
| 383 | C | A | -0.8176 | |
| 384 | A | A | -1.2550 | |
| 385 | E | A | -2.6859 | |
| 386 | N | A | -2.2967 | |
| 387 | K | A | -1.5785 | |
| 388 | T | A | 0.0000 | |
| 389 | F | A | -0.0327 | |
| 390 | A | A | 0.1927 | |
| 391 | N | A | 0.0000 | |
| 392 | T | A | 0.0000 | |
| 393 | L | A | 0.0000 | |
| 394 | L | A | 0.0437 | |
| 395 | Y | A | -0.4777 | |
| 396 | S | A | -1.4033 | |
| 397 | D | A | -2.8969 | |
| 398 | D | A | -2.7952 | |
| 399 | A | A | -1.7526 | |
| 400 | L | A | 0.0000 | |
| 401 | H | A | 0.0000 | |
| 402 | L | A | 0.0000 | |
| 403 | L | A | 0.0000 | |
| 404 | Q | A | 0.0000 | |
| 405 | A | A | 0.0000 | |
| 406 | K | A | -1.0810 | |
| 407 | G | A | 0.0000 | |
| 408 | D | A | -2.6885 | |
| 409 | H | A | -2.8781 | |
| 410 | E | A | -2.6860 | |
| 411 | S | A | -2.0005 | |
| 412 | T | A | 0.0000 | |
| 413 | A | A | -0.4796 | |
| 414 | V | A | 0.0000 | |
| 415 | S | A | -0.4107 | |
| 416 | L | A | 0.0000 | |
| 417 | A | A | 0.0000 | |
| 418 | R | A | -1.0643 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.6386 | |
| 421 | E | A | -2.4526 | |
| 422 | E | A | -1.4547 | |
| 423 | L | A | -1.2015 | |
| 424 | N | A | -1.9458 | |
| 425 | T | A | -0.9186 | |
| 426 | I | A | -0.3407 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine