| Chain sequence(s) |
B: SAVAEAAWEAAWPAVNAAARKYGPSAEIYQAARDALVEEAGPAAGEYVVVPDPSSAPPAPAEAVAAVAAASRAAARAVVAGSGC
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:49)
[INFO] Main: Simulation completed successfully. (00:00:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -0.5282 | |
| 2 | A | B | -0.2399 | |
| 3 | V | B | 0.0202 | |
| 4 | A | B | 0.0000 | |
| 5 | E | B | -1.7695 | |
| 6 | A | B | -0.8460 | |
| 7 | A | B | 0.0000 | |
| 8 | W | B | -1.1220 | |
| 9 | E | B | -1.8288 | |
| 10 | A | B | -0.8193 | |
| 11 | A | B | 0.0000 | |
| 12 | W | B | -0.2590 | |
| 13 | P | B | -0.4002 | |
| 14 | A | B | -0.0142 | |
| 15 | V | B | 0.0000 | |
| 16 | N | B | -1.0015 | |
| 17 | A | B | -1.1395 | |
| 18 | A | B | 0.0000 | |
| 19 | A | B | -1.5275 | |
| 20 | R | B | -2.6869 | |
| 21 | K | B | -2.4318 | |
| 22 | Y | B | -1.0183 | |
| 23 | G | B | -1.1237 | |
| 24 | P | B | -1.1755 | |
| 25 | S | B | -1.0006 | |
| 26 | A | B | -0.9328 | |
| 27 | E | B | -1.0701 | |
| 28 | I | B | 0.0000 | |
| 29 | Y | B | -0.6363 | |
| 30 | Q | B | -1.7195 | |
| 31 | A | B | -1.4528 | |
| 32 | A | B | 0.0000 | |
| 33 | R | B | -2.1008 | |
| 34 | D | B | -2.8722 | |
| 35 | A | B | 0.0000 | |
| 36 | L | B | 0.0000 | |
| 37 | V | B | -1.5299 | |
| 38 | E | B | -2.6274 | |
| 39 | E | B | -1.7986 | |
| 40 | A | B | -0.9705 | |
| 41 | G | B | -0.6252 | |
| 42 | P | B | -1.0289 | |
| 43 | A | B | -0.6825 | |
| 44 | A | B | 0.0000 | |
| 45 | G | B | 0.0000 | |
| 46 | E | B | -1.5711 | |
| 47 | Y | B | -0.7702 | |
| 48 | V | B | 0.0000 | |
| 49 | V | B | 1.1765 | |
| 50 | V | B | 0.2008 | |
| 51 | P | B | -0.6849 | |
| 52 | D | B | -1.7375 | |
| 53 | P | B | -1.4158 | |
| 54 | S | B | -0.9979 | |
| 55 | S | B | -0.4441 | |
| 56 | A | B | -0.3320 | |
| 57 | P | B | -0.4170 | |
| 58 | P | B | -0.5194 | |
| 59 | A | B | -0.6482 | |
| 60 | P | B | -0.6341 | |
| 61 | A | B | -0.8491 | |
| 62 | E | B | -1.6753 | |
| 63 | A | B | -0.8499 | |
| 64 | V | B | -0.5124 | |
| 65 | A | B | -0.4269 | |
| 66 | A | B | -0.3313 | |
| 67 | V | B | 0.0000 | |
| 68 | A | B | -0.7954 | |
| 69 | A | B | -0.0174 | |
| 70 | A | B | -0.1980 | |
| 71 | S | B | 0.0000 | |
| 72 | R | B | -1.5961 | |
| 73 | A | B | -0.7381 | |
| 74 | A | B | -0.6928 | |
| 75 | A | B | 0.0000 | |
| 76 | R | B | -1.9596 | |
| 77 | A | B | -0.6891 | |
| 78 | V | B | -0.4272 | |
| 79 | V | B | 0.1212 | |
| 80 | A | B | -0.2507 | |
| 81 | G | B | -0.2874 | |
| 82 | S | B | -0.1394 | |
| 83 | G | B | -0.1225 | |
| 84 | C | B | 0.4014 |