| Chain sequence(s) |
A: KAGTCPDGYTRTNYYCRRDGCGSWCNGAERQQPCIRGPCCCDLTYRTG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:40)
[INFO] Main: Simulation completed successfully. (00:00:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.7939 | |
| 2 | A | A | -0.9291 | |
| 3 | G | A | -0.7425 | |
| 4 | T | A | -0.4297 | |
| 5 | C | A | -0.1276 | |
| 6 | P | A | -0.9548 | |
| 7 | D | A | -1.9776 | |
| 8 | G | A | -1.2143 | |
| 9 | Y | A | -0.7637 | |
| 10 | T | A | -0.9445 | |
| 11 | R | A | -1.8542 | |
| 12 | T | A | -0.9762 | |
| 13 | N | A | -0.7285 | |
| 14 | Y | A | -0.0620 | |
| 15 | Y | A | 0.1826 | |
| 16 | C | A | -0.2572 | |
| 17 | R | A | -2.2465 | |
| 18 | R | A | -3.4723 | |
| 19 | D | A | -3.1922 | |
| 20 | G | A | -1.9965 | |
| 21 | C | A | -1.1928 | |
| 22 | G | A | -0.6328 | |
| 23 | S | A | -0.1855 | |
| 24 | W | A | 0.5323 | |
| 25 | C | A | -0.7827 | |
| 26 | N | A | -1.5925 | |
| 27 | G | A | -1.4186 | |
| 28 | A | A | -1.7720 | |
| 29 | E | A | -3.1129 | |
| 30 | R | A | -3.1143 | |
| 31 | Q | A | -2.0017 | |
| 32 | Q | A | -2.2356 | |
| 33 | P | A | -1.1778 | |
| 34 | C | A | -0.4621 | |
| 35 | I | A | -0.2218 | |
| 36 | R | A | -1.8879 | |
| 37 | G | A | -2.0945 | |
| 38 | P | A | -2.1793 | |
| 39 | C | A | -2.0253 | |
| 40 | C | A | 0.0000 | |
| 41 | C | A | 0.0000 | |
| 42 | D | A | 0.0000 | |
| 43 | L | A | -0.9757 | |
| 44 | T | A | -1.0212 | |
| 45 | Y | A | -0.2908 | |
| 46 | R | A | -1.6550 | |
| 47 | T | A | -1.0174 | |
| 48 | G | A | -1.0136 |