| Chain sequence(s) |
A: GQVRQRYLYTDDAQQTEAHLEIREDGTVGGAADQSPESLLQLKALKPGVIQILGVKTSRFLCQRPDGALYGSLHFDPEACSFRELLLEDGYNVYQSEAHGLPLHLPGNKSPHRDPAPRGPARFLPLPG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 14 | G | A | -1.1684 | |
| 15 | Q | A | -1.2886 | |
| 16 | V | A | -0.8633 | |
| 17 | R | A | -2.5166 | |
| 18 | Q | A | -2.0277 | |
| 19 | R | A | -1.2408 | |
| 20 | Y | A | -0.4395 | |
| 21 | L | A | 0.0000 | |
| 22 | Y | A | -0.6942 | |
| 23 | T | A | 0.0000 | |
| 24 | D | A | -2.4437 | |
| 25 | D | A | -3.2595 | |
| 26 | A | A | 0.0000 | |
| 27 | Q | A | -3.2139 | |
| 28 | Q | A | -2.8082 | |
| 29 | T | A | -2.3544 | |
| 30 | E | A | -3.3758 | |
| 31 | A | A | -2.4144 | |
| 32 | H | A | -1.4689 | |
| 33 | L | A | 0.0000 | |
| 34 | E | A | -1.0979 | |
| 35 | I | A | 0.0000 | |
| 36 | R | A | -2.6084 | |
| 37 | E | A | -3.5025 | |
| 38 | D | A | -2.9428 | |
| 39 | G | A | 0.0000 | |
| 40 | T | A | -1.1510 | |
| 41 | V | A | 0.0000 | |
| 42 | G | A | 0.0000 | |
| 43 | G | A | -1.0596 | |
| 44 | A | A | -1.3412 | |
| 45 | A | A | -1.5614 | |
| 46 | D | A | -2.8078 | |
| 47 | Q | A | -2.3647 | |
| 48 | S | A | -1.5532 | |
| 49 | P | A | -1.1008 | |
| 50 | E | A | -1.4189 | |
| 51 | S | A | 0.0000 | |
| 52 | L | A | -0.6624 | |
| 53 | L | A | 0.0000 | |
| 54 | Q | A | -0.6928 | |
| 55 | L | A | -1.0094 | |
| 56 | K | A | -1.1753 | |
| 57 | A | A | -0.8931 | |
| 58 | L | A | -0.5118 | |
| 59 | K | A | -1.8034 | |
| 60 | P | A | -1.3151 | |
| 61 | G | A | -1.4783 | |
| 62 | V | A | 0.0000 | |
| 63 | I | A | 0.0000 | |
| 64 | Q | A | 0.0000 | |
| 65 | I | A | 0.0000 | |
| 66 | L | A | 0.3351 | |
| 67 | G | A | 0.0000 | |
| 68 | V | A | -0.1247 | |
| 69 | K | A | -1.8268 | |
| 70 | T | A | -1.5323 | |
| 71 | S | A | -0.4669 | |
| 72 | R | A | -0.2601 | |
| 73 | F | A | 0.7696 | |
| 74 | L | A | 0.0000 | |
| 75 | C | A | 0.0000 | |
| 76 | Q | A | 0.0000 | |
| 77 | R | A | -1.9482 | |
| 78 | P | A | -2.0235 | |
| 79 | D | A | -2.2463 | |
| 80 | G | A | 0.0000 | |
| 81 | A | A | -0.9077 | |
| 82 | L | A | 0.0000 | |
| 83 | Y | A | -0.0629 | |
| 84 | G | A | 0.0000 | |
| 85 | S | A | 0.2690 | |
| 86 | L | A | 1.1989 | |
| 87 | H | A | 0.1410 | |
| 88 | F | A | 0.4352 | |
| 89 | D | A | -1.2932 | |
| 90 | P | A | -1.4632 | |
| 91 | E | A | -2.7004 | |
| 92 | A | A | -1.7630 | |
| 93 | C | A | 0.0000 | |
| 94 | S | A | 0.0000 | |
| 95 | F | A | 0.0000 | |
| 96 | R | A | -2.3587 | |
| 97 | E | A | -1.3136 | |
| 98 | L | A | 0.1912 | |
| 99 | L | A | 0.9160 | |
| 100 | L | A | -0.3020 | |
| 101 | E | A | -2.0790 | |
| 102 | D | A | -2.3359 | |
| 103 | G | A | -1.1653 | |
| 104 | Y | A | -0.2674 | |
| 105 | N | A | 0.0480 | |
| 106 | V | A | 0.0000 | |
| 107 | Y | A | 0.0000 | |
| 108 | Q | A | -1.3262 | |
| 109 | S | A | 0.0000 | |
| 110 | E | A | -2.6314 | |
| 111 | A | A | -1.9894 | |
| 112 | H | A | -1.7784 | |
| 113 | G | A | -1.3756 | |
| 114 | L | A | -1.2158 | |
| 115 | P | A | -0.9706 | |
| 116 | L | A | 0.0000 | |
| 117 | H | A | -0.5675 | |
| 118 | L | A | -0.2600 | |
| 119 | P | A | -0.7372 | |
| 120 | G | A | -1.4519 | |
| 121 | N | A | -1.7837 | |
| 122 | K | A | -3.2090 | |
| 123 | S | A | -2.2385 | |
| 124 | P | A | -2.5264 | |
| 125 | H | A | -2.8147 | |
| 126 | R | A | -3.6343 | |
| 127 | D | A | -3.7112 | |
| 128 | P | A | -2.3251 | |
| 129 | A | A | -1.2847 | |
| 130 | P | A | -1.5500 | |
| 131 | R | A | -2.4513 | |
| 132 | G | A | -1.6221 | |
| 133 | P | A | -1.0389 | |
| 134 | A | A | -1.2856 | |
| 135 | R | A | -1.2699 | |
| 136 | F | A | 0.0000 | |
| 137 | L | A | 0.2516 | |
| 138 | P | A | 0.0546 | |
| 139 | L | A | 0.0160 | |
| 140 | P | A | -0.9570 | |
| 141 | G | A | -1.3800 |