| Chain sequence(s) |
A: LPAPKNLGCFSRYRRLSRLSWETPYPSLSNFDSFLIQYQESEKVGEAIVLIVPGSERSYDLTGLKPGTEYTVSIYGVLKLSAAWWPSNPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:56)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.7464 | |
| 2 | P | A | -0.0315 | |
| 3 | A | A | -0.7103 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -1.9496 | |
| 6 | N | A | -2.0372 | |
| 7 | L | A | -0.6850 | |
| 8 | G | A | -0.1761 | |
| 9 | C | A | 0.7308 | |
| 10 | F | A | 1.2818 | |
| 11 | S | A | -0.2417 | |
| 12 | R | A | -1.0539 | |
| 13 | Y | A | -0.4571 | |
| 14 | R | A | -2.5600 | |
| 15 | R | A | -2.5947 | |
| 16 | L | A | -1.2534 | |
| 17 | S | A | 0.0000 | |
| 18 | R | A | -0.6482 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.8251 | |
| 21 | W | A | 0.0000 | |
| 22 | E | A | -2.0091 | |
| 23 | T | A | 0.0000 | |
| 24 | P | A | -0.0912 | |
| 25 | Y | A | 0.7626 | |
| 26 | P | A | 0.1840 | |
| 27 | S | A | 0.4618 | |
| 28 | L | A | 1.2258 | |
| 29 | S | A | -0.2155 | |
| 30 | N | A | -1.3983 | |
| 31 | F | A | 0.0000 | |
| 32 | D | A | -2.0900 | |
| 33 | S | A | -0.8264 | |
| 34 | F | A | 0.0000 | |
| 35 | L | A | 1.2957 | |
| 36 | I | A | 0.0000 | |
| 37 | Q | A | 0.7250 | |
| 38 | Y | A | 0.3755 | |
| 39 | Q | A | -0.8182 | |
| 40 | E | A | -1.8200 | |
| 41 | S | A | -1.5289 | |
| 42 | E | A | -2.5869 | |
| 43 | K | A | -1.9691 | |
| 44 | V | A | -0.0306 | |
| 45 | G | A | -0.9388 | |
| 46 | E | A | -1.7713 | |
| 47 | A | A | -0.2755 | |
| 48 | I | A | 0.9518 | |
| 49 | V | A | 2.2657 | |
| 50 | L | A | 2.2437 | |
| 51 | I | A | 2.4622 | |
| 52 | V | A | 0.0000 | |
| 53 | P | A | -0.5785 | |
| 54 | G | A | -1.2221 | |
| 55 | S | A | -1.3346 | |
| 56 | E | A | -1.3679 | |
| 57 | R | A | -1.1690 | |
| 58 | S | A | -0.8430 | |
| 59 | Y | A | -0.3470 | |
| 60 | D | A | -0.7078 | |
| 61 | L | A | 0.0000 | |
| 62 | T | A | -1.0201 | |
| 63 | G | A | -1.4904 | |
| 64 | L | A | 0.0000 | |
| 65 | K | A | -2.9114 | |
| 66 | P | A | -2.2026 | |
| 67 | G | A | -1.7704 | |
| 68 | T | A | 0.0000 | |
| 69 | E | A | -1.9764 | |
| 70 | Y | A | 0.0000 | |
| 71 | T | A | -0.0205 | |
| 72 | V | A | 0.0000 | |
| 73 | S | A | 0.2174 | |
| 74 | I | A | 0.0000 | |
| 75 | Y | A | 0.3088 | |
| 76 | G | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | L | A | -0.4905 | |
| 79 | K | A | -1.2993 | |
| 80 | L | A | 0.0545 | |
| 81 | S | A | -0.0220 | |
| 82 | A | A | 0.0599 | |
| 83 | A | A | 0.4049 | |
| 84 | W | A | 0.7393 | |
| 85 | W | A | 1.1636 | |
| 86 | P | A | 0.3923 | |
| 87 | S | A | 0.0000 | |
| 88 | N | A | -0.9701 | |
| 89 | P | A | -0.6963 | |
| 90 | L | A | -0.5715 | |
| 91 | S | A | -0.0831 | |
| 92 | A | A | 0.8555 | |
| 93 | I | A | 1.6090 | |
| 94 | F | A | 0.0000 | |
| 95 | T | A | -0.5881 | |
| 96 | T | A | -1.4183 |