Project name: query_structure

Status: done

Started: 2026-03-16 23:02:05
Settings
Chain sequence(s) A: CSNKVCYNGIPCAESCVWIPCTVTALIGCG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:08)
Show buried residues

Minimal score value
-1.6229
Maximal score value
3.0787
Average score
1.1548
Total score value
34.644

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 1.1717
2 S A -0.5985
3 N A -1.6229
4 K A -1.3603
5 V A 0.9719
6 C A 1.3717
7 Y A 1.3995
8 N A -0.2353
9 G A 0.3742
10 I A 1.8316
11 P A 0.8569
12 C A 1.3643
13 A A -0.1117
14 E A -1.2874
15 S A 0.5758
16 C A 1.7049
17 V A 2.9262
18 W A 3.0787
19 I A 3.0273
20 P A 1.7456
21 C A 1.2913
22 T A 1.4938
23 V A 2.3880
24 T A 2.0266
25 A A 1.6953
26 L A 2.7717
27 I A 2.8116
28 G A 1.1839
29 C A 1.3566
30 G A 0.4410
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Laboratory of Theory of Biopolymers 2018