| Chain sequence(s) |
A: CSNKVCYNGIPCAESCVWIPCTVTALIGCG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 1.1717 | |
| 2 | S | A | -0.5985 | |
| 3 | N | A | -1.6229 | |
| 4 | K | A | -1.3603 | |
| 5 | V | A | 0.9719 | |
| 6 | C | A | 1.3717 | |
| 7 | Y | A | 1.3995 | |
| 8 | N | A | -0.2353 | |
| 9 | G | A | 0.3742 | |
| 10 | I | A | 1.8316 | |
| 11 | P | A | 0.8569 | |
| 12 | C | A | 1.3643 | |
| 13 | A | A | -0.1117 | |
| 14 | E | A | -1.2874 | |
| 15 | S | A | 0.5758 | |
| 16 | C | A | 1.7049 | |
| 17 | V | A | 2.9262 | |
| 18 | W | A | 3.0787 | |
| 19 | I | A | 3.0273 | |
| 20 | P | A | 1.7456 | |
| 21 | C | A | 1.2913 | |
| 22 | T | A | 1.4938 | |
| 23 | V | A | 2.3880 | |
| 24 | T | A | 2.0266 | |
| 25 | A | A | 1.6953 | |
| 26 | L | A | 2.7717 | |
| 27 | I | A | 2.8116 | |
| 28 | G | A | 1.1839 | |
| 29 | C | A | 1.3566 | |
| 30 | G | A | 0.4410 |