Chain sequence(s) |
A: QVQLVESGGGLVQPGGSLRLSCAASGLPEPSIAVYSLGWFRQAPGQGLEAVAAIDNTGKKTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAGYNPGEPATEPEDYDYWGQGTLVTVSS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:07) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:07) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:08) [INFO] runJob: Creating pdb object from: input.pdb (00:00:08) [INFO] FoldX: Starting FoldX energy minimalization (00:00:08) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51) [INFO] Main: Simulation completed successfully. (00:00:52) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | A | -1.5029 | |
2 | V | A | -0.9399 | |
3 | Q | A | -0.9680 | |
4 | L | A | 0.0000 | |
5 | V | A | 1.1184 | |
6 | E | A | 0.3171 | |
7 | S | A | -0.1820 | |
8 | G | A | -0.6922 | |
9 | G | A | 0.0912 | |
10 | G | A | 0.6719 | |
11 | L | A | 1.3888 | |
12 | V | A | -0.1121 | |
13 | Q | A | -1.4489 | |
14 | P | A | -1.8165 | |
15 | G | A | -1.5401 | |
16 | G | A | -1.0139 | |
17 | S | A | -1.2738 | |
18 | L | A | -0.8536 | |
19 | R | A | -2.0636 | |
20 | L | A | 0.0000 | |
21 | S | A | -0.4067 | |
22 | C | A | 0.0000 | |
23 | A | A | -0.0983 | |
24 | A | A | 0.0000 | |
25 | S | A | -0.9975 | |
26 | G | A | -1.2836 | |
27 | L | A | -0.9334 | |
28 | P | A | -0.9032 | |
29 | E | A | -1.0980 | |
30 | P | A | -0.9201 | |
31 | S | A | -1.0467 | |
32 | I | A | 0.0000 | |
33 | A | A | -0.4832 | |
34 | V | A | 0.2469 | |
35 | Y | A | 0.0000 | |
36 | S | A | 0.0000 | |
37 | L | A | 0.0000 | |
38 | G | A | 0.0000 | |
39 | W | A | 0.0000 | |
40 | F | A | 0.0000 | |
41 | R | A | 0.0000 | |
42 | Q | A | -0.7120 | |
43 | A | A | -0.9759 | |
44 | P | A | -0.9823 | |
45 | G | A | -1.2749 | |
46 | Q | A | -1.8158 | |
47 | G | A | -1.1651 | |
48 | L | A | -0.4787 | |
49 | E | A | -1.0429 | |
50 | A | A | -0.5690 | |
51 | V | A | 0.0000 | |
52 | A | A | 0.0000 | |
53 | A | A | 0.0000 | |
54 | I | A | 0.0000 | |
55 | D | A | 0.0000 | |
56 | N | A | -1.0262 | |
57 | T | A | -1.4170 | |
58 | G | A | -2.0146 | |
59 | K | A | -2.8648 | |
60 | K | A | -2.8549 | |
61 | T | A | -1.3238 | |
62 | Y | A | -0.5919 | |
63 | Y | A | -0.7561 | |
64 | A | A | -1.3715 | |
65 | D | A | -2.4537 | |
66 | S | A | -1.7844 | |
67 | V | A | 0.0000 | |
68 | K | A | -2.5761 | |
69 | G | A | -1.7668 | |
70 | R | A | -1.5505 | |
71 | F | A | 0.0000 | |
72 | T | A | -0.8037 | |
73 | I | A | 0.0000 | |
74 | S | A | -0.6009 | |
75 | R | A | -1.1564 | |
76 | D | A | -1.8425 | |
77 | N | A | -1.9055 | |
78 | S | A | -1.7238 | |
79 | K | A | -2.4408 | |
80 | N | A | -1.7445 | |
81 | T | A | 0.0000 | |
82 | L | A | 0.0000 | |
83 | Y | A | -0.6521 | |
84 | L | A | 0.0000 | |
85 | Q | A | -1.2167 | |
86 | M | A | 0.0000 | |
87 | N | A | -1.5282 | |
88 | S | A | -1.4381 | |
89 | L | A | 0.0000 | |
90 | R | A | -2.9255 | |
91 | A | A | -2.0331 | |
92 | E | A | -2.4614 | |
93 | D | A | 0.0000 | |
94 | T | A | -0.5122 | |
95 | A | A | 0.0000 | |
96 | V | A | 0.8005 | |
97 | Y | A | 0.0000 | |
98 | Y | A | 0.3679 | |
99 | C | A | 0.0000 | |
100 | A | A | 0.0000 | |
101 | A | A | 0.0000 | |
102 | G | A | 0.0000 | |
103 | Y | A | 0.6930 | |
104 | N | A | -0.4200 | |
105 | P | A | -0.6696 | |
106 | G | A | -1.6798 | |
107 | E | A | -2.6896 | |
108 | P | A | 0.0000 | |
109 | A | A | 0.0000 | |
110 | T | A | -1.5860 | |
111 | E | A | -2.7299 | |
112 | P | A | -2.2349 | |
113 | E | A | -3.1989 | |
114 | D | A | -2.5364 | |
115 | Y | A | 0.0000 | |
116 | D | A | -1.8980 | |
117 | Y | A | -0.5054 | |
118 | W | A | -0.0312 | |
119 | G | A | -0.0519 | |
120 | Q | A | -0.8481 | |
121 | G | A | 0.0851 | |
122 | T | A | 0.6100 | |
123 | L | A | 1.6955 | |
124 | V | A | 0.0000 | |
125 | T | A | 0.3019 | |
126 | V | A | 0.0000 | |
127 | S | A | -0.7956 | |
128 | S | A | -0.5075 |