| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFRDIVKDGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTAPQHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPDGHPLPSLPPPSPLYVKPPPWSPYAVLPSYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAENVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9465 | |
| 2 | L | A | 1.9714 | |
| 3 | P | A | 0.6666 | |
| 4 | P | A | 0.3447 | |
| 5 | T | A | 0.1162 | |
| 6 | T | A | 0.1407 | |
| 7 | P | A | 0.1936 | |
| 8 | V | A | 1.2167 | |
| 9 | A | A | 0.0253 | |
| 10 | K | A | -1.1683 | |
| 11 | V | A | -0.4335 | |
| 12 | Q | A | -1.5620 | |
| 13 | S | A | -1.6213 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4232 | |
| 16 | E | A | -2.4447 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4561 | |
| 20 | P | A | 0.1284 | |
| 21 | T | A | 0.1642 | |
| 22 | S | A | -0.0943 | |
| 23 | L | A | 0.1034 | |
| 24 | F | A | -0.0120 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1546 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7159 | |
| 31 | R | A | -2.5996 | |
| 32 | L | A | -0.7460 | |
| 33 | L | A | 1.1789 | |
| 34 | T | A | 1.3578 | |
| 35 | V | A | 1.7952 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2523 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6512 | |
| 40 | R | A | -1.7160 | |
| 41 | D | A | -0.8741 | |
| 42 | I | A | 0.6730 | |
| 43 | V | A | 0.7444 | |
| 44 | K | A | -1.5003 | |
| 45 | D | A | -2.4651 | |
| 46 | G | A | -1.5278 | |
| 47 | K | A | -1.1319 | |
| 48 | V | A | 1.3734 | |
| 49 | V | A | 1.9508 | |
| 50 | V | A | 1.2180 | |
| 51 | P | A | 0.4492 | |
| 52 | K | A | -0.6436 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1044 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4870 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2702 | |
| 70 | K | A | -1.8167 | |
| 71 | F | A | -0.6804 | |
| 72 | A | A | -0.5927 | |
| 73 | L | A | -0.9316 | |
| 74 | P | A | -1.2538 | |
| 75 | Q | A | -2.4832 | |
| 76 | K | A | -3.1015 | |
| 77 | D | A | -2.9952 | |
| 78 | F | A | -1.6519 | |
| 79 | Y | A | -1.9349 | |
| 80 | D | A | -2.7764 | |
| 81 | P | A | -2.3543 | |
| 82 | E | A | -3.0752 | |
| 83 | K | A | -3.4509 | |
| 84 | E | A | -2.5177 | |
| 85 | R | A | -1.3202 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6252 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -1.0221 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3647 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6879 | |
| 99 | G | A | -0.5468 | |
| 100 | P | A | -0.4276 | |
| 101 | L | A | -0.0092 | |
| 102 | G | A | -0.2551 | |
| 103 | K | A | -0.7276 | |
| 104 | G | A | -0.5617 | |
| 105 | S | A | -0.6108 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1192 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4270 | |
| 110 | L | A | 0.3059 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1114 | |
| 113 | K | A | -0.4284 | |
| 114 | L | A | -1.3711 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.4954 | |
| 117 | T | A | -1.3193 | |
| 118 | E | A | -2.5389 | |
| 119 | N | A | -2.4021 | |
| 120 | P | A | -1.7331 | |
| 121 | T | A | -0.9341 | |
| 122 | A | A | -0.7219 | |
| 123 | P | A | -0.8313 | |
| 124 | Q | A | -1.7754 | |
| 125 | H | A | -1.9415 | |
| 126 | E | A | -2.8500 | |
| 127 | G | A | -2.2919 | |
| 128 | A | A | -1.5544 | |
| 129 | D | A | -2.4450 | |
| 130 | D | A | -2.0329 | |
| 131 | R | A | -1.1085 | |
| 132 | V | A | 0.2539 | |
| 133 | A | A | 0.4417 | |
| 134 | F | A | 0.2709 | |
| 135 | S | A | -0.1085 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7857 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5564 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2596 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0739 | |
| 157 | D | A | 0.3191 | |
| 158 | I | A | 0.8404 | |
| 159 | A | A | 0.1137 | |
| 160 | E | A | -1.4765 | |
| 161 | P | A | -0.2448 | |
| 162 | C | A | 0.1730 | |
| 163 | P | A | -0.1729 | |
| 164 | G | A | -0.0771 | |
| 165 | L | A | 0.5841 | |
| 166 | P | A | -0.1105 | |
| 167 | P | A | -0.3401 | |
| 168 | G | A | -0.4166 | |
| 169 | A | A | -0.0164 | |
| 170 | C | A | 0.7518 | |
| 171 | P | A | 0.5461 | |
| 172 | P | A | 0.8072 | |
| 173 | I | A | 2.0226 | |
| 174 | Q | A | 0.8106 | |
| 175 | L | A | 1.4024 | |
| 176 | V | A | 0.7985 | |
| 177 | N | A | -0.3251 | |
| 178 | S | A | 0.0120 | |
| 179 | V | A | 0.4130 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3690 | |
| 182 | D | A | 0.0773 | |
| 183 | G | A | -0.1642 | |
| 184 | D | A | -0.6034 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4953 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1047 | |
| 190 | F | A | 0.0171 | |
| 191 | G | A | -0.1553 | |
| 192 | N | A | -0.3646 | |
| 193 | M | A | -0.2165 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4251 | |
| 197 | E | A | -2.6201 | |
| 198 | L | A | -1.2234 | |
| 199 | Q | A | -2.5375 | |
| 200 | Q | A | -3.3346 | |
| 201 | D | A | -3.6011 | |
| 202 | R | A | -3.3445 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1995 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3705 | |
| 211 | S | A | -1.9313 | |
| 212 | T | A | -1.4996 | |
| 213 | R | A | -2.2690 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2286 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3043 | |
| 220 | L | A | 0.5158 | |
| 221 | K | A | -1.2762 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9499 | |
| 224 | N | A | -1.5587 | |
| 225 | E | A | -1.3032 | |
| 226 | A | A | -0.6755 | |
| 227 | Y | A | -0.4507 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7030 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1440 | |
| 234 | F | A | 0.0270 | |
| 235 | G | A | -0.9447 | |
| 236 | R | A | -2.7259 | |
| 237 | R | A | -3.0493 | |
| 238 | E | A | -2.1744 | |
| 239 | Q | A | -0.1336 | |
| 240 | V | A | 1.5787 | |
| 241 | Y | A | 1.2669 | |
| 242 | A | A | 0.1501 | |
| 243 | R | A | -1.1983 | |
| 244 | H | A | -1.2289 | |
| 245 | F | A | -0.2610 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6119 | |
| 249 | S | A | -1.3618 | |
| 250 | G | A | -1.1461 | |
| 251 | P | A | -1.0562 | |
| 252 | D | A | -1.1768 | |
| 253 | G | A | -1.2013 | |
| 254 | H | A | -1.3199 | |
| 255 | P | A | -0.6805 | |
| 256 | L | A | 0.5006 | |
| 257 | P | A | 0.2269 | |
| 258 | S | A | 0.2217 | |
| 259 | L | A | 0.5314 | |
| 260 | P | A | -0.2733 | |
| 261 | P | A | -0.3533 | |
| 262 | P | A | -0.0389 | |
| 263 | S | A | 0.4839 | |
| 264 | P | A | 0.8033 | |
| 265 | L | A | 1.8248 | |
| 266 | Y | A | 1.4390 | |
| 267 | V | A | 1.2246 | |
| 268 | K | A | -0.3252 | |
| 269 | P | A | 0.2386 | |
| 270 | P | A | 0.0307 | |
| 271 | P | A | 0.3844 | |
| 272 | W | A | 1.1099 | |
| 273 | S | A | 0.7584 | |
| 274 | P | A | 0.6383 | |
| 275 | Y | A | 1.3616 | |
| 276 | A | A | 1.3143 | |
| 277 | V | A | 2.0323 | |
| 278 | L | A | 1.5054 | |
| 279 | P | A | 0.1916 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.2601 | |
| 282 | D | A | -0.3057 | |
| 283 | Y | A | 1.1423 | |
| 284 | F | A | 0.8275 | |
| 285 | G | A | 0.1021 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9458 | |
| 291 | L | A | 1.6475 | |
| 292 | V | A | 0.6414 | |
| 293 | S | A | -0.1707 | |
| 294 | S | A | -1.0014 | |
| 295 | D | A | -1.8731 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0981 | |
| 298 | L | A | -1.2500 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.7644 | |
| 301 | R | A | -2.0918 | |
| 302 | P | A | -1.0634 | |
| 303 | F | A | -0.2286 | |
| 304 | W | A | -0.5283 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0753 | |
| 307 | R | A | -2.9180 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6526 | |
| 310 | G | A | -1.4160 | |
| 311 | N | A | -1.3927 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9503 | |
| 319 | N | A | -1.0118 | |
| 320 | E | A | -1.0471 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3676 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1390 | |
| 333 | N | A | 0.5090 | |
| 334 | F | A | 1.7461 | |
| 335 | T | A | 0.8919 | |
| 336 | I | A | 0.5023 | |
| 337 | S | A | -0.9218 | |
| 338 | Q | A | -1.7094 | |
| 339 | Q | A | -1.2884 | |
| 340 | L | A | 0.6834 | |
| 341 | C | A | 0.5294 | |
| 342 | T | A | 0.2479 | |
| 343 | P | A | -0.0028 | |
| 344 | A | A | -0.4347 | |
| 345 | E | A | -1.6899 | |
| 346 | N | A | -1.0503 | |
| 347 | V | A | 1.0136 | |
| 348 | Y | A | 1.2389 | |
| 349 | D | A | 0.2290 | |
| 350 | P | A | -0.3231 | |
| 351 | S | A | -0.2663 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7088 | |
| 354 | K | A | -1.7156 | |
| 355 | N | A | -1.7206 | |
| 356 | Y | A | -0.0289 | |
| 357 | L | A | 0.6552 | |
| 358 | R | A | 0.9576 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3539 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0329 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9394 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6747 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2846 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3338 | |
| 376 | L | A | -1.7645 | |
| 377 | D | A | -2.0632 | |
| 378 | P | A | -1.0757 | |
| 379 | G | A | -1.0336 | |
| 380 | V | A | -0.9428 | |
| 381 | L | A | -0.5507 | |
| 382 | A | A | -0.6705 | |
| 383 | H | A | -0.8601 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4253 | |
| 386 | T | A | -0.5909 | |
| 387 | M | A | -0.3424 | |
| 388 | N | A | -0.8758 | |
| 389 | P | A | -1.3029 | |
| 390 | T | A | -1.6000 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5718 | |
| 393 | E | A | -2.9935 | |
| 394 | N | A | -2.8378 | |
| 395 | W | A | -1.5582 | |
| 396 | N | A | -1.1552 | |
| 397 | L | A | -0.1915 | |
| 398 | G | A | 0.5563 | |
| 399 | F | A | 2.4387 | |
| 400 | V | A | 1.8623 | |
| 401 | P | A | 0.0705 | |
| 402 | P | A | -1.9643 | |
| 403 | K | A | -3.5017 | |
| 404 | E | A | -3.9995 | |
| 405 | R | A | -4.4489 | |
| 406 | E | A | -4.0033 | |
| 407 | D | A | -2.9584 | |
| 408 | P | A | -1.8129 | |
| 409 | Y | A | -0.9890 | |
| 410 | K | A | -2.1042 | |
| 411 | G | A | -0.6420 | |
| 412 | L | A | 0.6572 | |
| 413 | I | A | 1.5782 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3936 | |
| 416 | E | A | -1.6526 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8350 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8888 | |
| 421 | E | A | -2.4995 | |
| 422 | R | A | -2.0665 | |
| 423 | F | A | -1.0229 | |
| 424 | S | A | -1.3158 | |
| 425 | Q | A | -1.7779 | |
| 426 | D | A | -2.8846 | |
| 427 | L | A | -1.9906 | |
| 428 | D | A | -2.7745 | |
| 429 | Q | A | -2.6098 | |
| 430 | F | A | -1.4485 | |
| 431 | A | A | -0.9125 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6150 | |
| 435 | K | A | -0.7577 | |
| 436 | F | A | 0.1369 | |
| 437 | L | A | 1.0170 | |
| 438 | Y | A | 0.8129 | |
| 439 | Q | A | -0.2748 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine