| Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAASGLGPYPFSSYGWAWFRQAPGQGLEAVAAIGGDGSVTYYHPSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAGGGPPSDGRYDYWGQGTLVTVS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:45)
[INFO] Main: Simulation completed successfully. (00:01:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.4374 | |
| 2 | V | H | -0.6838 | |
| 3 | Q | H | -0.7883 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0759 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | 0.0123 | |
| 8 | G | H | -0.4668 | |
| 9 | G | H | 0.2406 | |
| 10 | G | H | 0.8741 | |
| 11 | L | H | 1.3842 | |
| 12 | V | H | -0.0443 | |
| 13 | Q | H | -1.3379 | |
| 14 | P | H | -1.6362 | |
| 15 | G | H | -1.4535 | |
| 16 | G | H | -0.9513 | |
| 17 | S | H | -1.0727 | |
| 18 | L | H | -0.5949 | |
| 19 | R | H | -1.4806 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.2228 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.1707 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.7882 | |
| 26 | G | H | -1.0174 | |
| 27 | L | H | 0.0000 | |
| 28 | G | H | -0.4630 | |
| 29 | P | H | 0.0325 | |
| 30 | Y | H | 0.7539 | |
| 31 | P | H | -0.0430 | |
| 32 | F | H | 0.0000 | |
| 33 | S | H | -1.0466 | |
| 34 | S | H | -0.4954 | |
| 35 | Y | H | 0.0000 | |
| 36 | G | H | -0.7197 | |
| 37 | W | H | 0.0000 | |
| 38 | A | H | 0.0000 | |
| 39 | W | H | 0.0000 | |
| 40 | F | H | 0.4523 | |
| 41 | R | H | 0.0000 | |
| 42 | Q | H | -0.4001 | |
| 43 | A | H | -0.8667 | |
| 44 | P | H | -0.9955 | |
| 45 | G | H | -1.3661 | |
| 46 | Q | H | -1.6569 | |
| 47 | G | H | -0.8304 | |
| 48 | L | H | 0.5022 | |
| 49 | E | H | -0.1651 | |
| 50 | A | H | 0.1984 | |
| 51 | V | H | 0.0000 | |
| 52 | A | H | 0.0000 | |
| 53 | A | H | 0.5435 | |
| 54 | I | H | 0.0000 | |
| 55 | G | H | -0.3535 | |
| 56 | G | H | -1.1856 | |
| 57 | D | H | -2.0308 | |
| 58 | G | H | -1.1092 | |
| 59 | S | H | -0.3090 | |
| 60 | V | H | 0.9454 | |
| 61 | T | H | 1.1252 | |
| 62 | Y | H | 1.3007 | |
| 63 | Y | H | -0.0183 | |
| 64 | H | H | -0.7210 | |
| 65 | P | H | -0.9448 | |
| 66 | S | H | -1.0719 | |
| 67 | V | H | 0.0000 | |
| 68 | K | H | -1.8979 | |
| 69 | G | H | -1.4680 | |
| 70 | R | H | 0.0000 | |
| 71 | F | H | 0.0000 | |
| 72 | T | H | -0.5486 | |
| 73 | I | H | 0.0000 | |
| 74 | S | H | -0.3334 | |
| 75 | R | H | -1.3486 | |
| 76 | D | H | -1.9553 | |
| 77 | N | H | -2.2057 | |
| 78 | S | H | -1.7241 | |
| 79 | K | H | -2.4817 | |
| 80 | N | H | -1.9563 | |
| 81 | T | H | -1.0954 | |
| 82 | L | H | 0.0000 | |
| 83 | Y | H | -0.4608 | |
| 84 | L | H | 0.0000 | |
| 85 | Q | H | -0.9205 | |
| 86 | M | H | 0.0000 | |
| 87 | N | H | -1.2752 | |
| 88 | S | H | -1.2241 | |
| 89 | L | H | 0.0000 | |
| 90 | R | H | -2.2924 | |
| 91 | A | H | -1.7193 | |
| 92 | E | H | -2.2470 | |
| 93 | D | H | 0.0000 | |
| 94 | T | H | -0.4118 | |
| 95 | A | H | 0.0000 | |
| 96 | V | H | 0.8745 | |
| 97 | Y | H | 0.0000 | |
| 98 | Y | H | 0.5294 | |
| 99 | C | H | 0.0000 | |
| 100 | A | H | 0.0000 | |
| 101 | A | H | 0.0000 | |
| 102 | G | H | 0.0000 | |
| 103 | G | H | -1.0108 | |
| 104 | G | H | -0.8718 | |
| 105 | P | H | -0.8933 | |
| 106 | P | H | -1.3721 | |
| 107 | S | H | -2.2630 | |
| 108 | D | H | -2.6752 | |
| 109 | G | H | -2.2503 | |
| 110 | R | H | -2.9708 | |
| 111 | Y | H | -1.7490 | |
| 112 | D | H | -1.8985 | |
| 113 | Y | H | -0.4498 | |
| 114 | W | H | 0.2762 | |
| 115 | G | H | 0.0966 | |
| 116 | Q | H | -0.8087 | |
| 117 | G | H | 0.1257 | |
| 118 | T | H | 0.6274 | |
| 119 | L | H | 1.7066 | |
| 120 | V | H | 0.0000 | |
| 121 | T | H | 0.3485 | |
| 122 | V | H | 0.0000 | |
| 123 | S | H | -0.7284 |