Project name: 1cew

Status: done

Started: 2025-03-04 14:37:33
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Chain sequence(s) I: GAPVPVDENDEGLQRALQFAMAEYNRASNDKYSSRVVRVISAKRQLVSGIKYILQVEIGRTTCPKSSGDLQSCEFHDEPEMAKYTTCTFVVYSIPWLNQIKLLESKCQ
input PDB
Selected Chain(s) I
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with I chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:35)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:36)
Show buried residues

Minimal score value
-3.7912
Maximal score value
2.2388
Average score
-0.8034
Total score value
-86.765

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
9 G I 0.2845
10 A I 0.4441
11 P I 0.5602
12 V I 1.0772
13 P I -0.4956
14 V I -1.8214
15 D I -3.4649
16 E I -3.7912
17 N I -3.5177
18 D I -3.4700
19 E I -3.4889
20 G I -2.4960
21 L I 0.0000
22 Q I -3.1979
23 R I -2.3095
24 A I 0.0000
25 L I 0.0000
26 Q I -1.6954
27 F I -0.9376
28 A I 0.0000
29 M I 0.0000
30 A I -1.1027
31 E I -1.4856
32 Y I -1.0083
33 N I -1.7933
34 R I -2.7422
35 A I -1.5315
36 S I -1.8140
37 N I -2.3876
38 D I -2.4857
39 K I -2.6535
40 Y I -1.3431
41 S I 0.0000
42 S I -0.5198
43 R I -0.3358
44 V I -0.0280
45 V I -0.1268
46 R I -1.2784
47 V I -0.6107
48 I I 0.0240
49 S I -0.6536
50 A I -0.7855
51 K I -1.0333
52 R I -0.3384
53 Q I 0.8091
54 L I 2.2214
55 V I 2.2388
56 S I 1.1738
57 G I 0.0000
58 I I 1.0291
59 K I 0.2587
60 Y I 0.0000
61 I I -0.1940
62 L I 0.0000
63 Q I -0.6144
64 V I 0.0000
65 E I -0.3702
66 I I 0.0000
67 G I 0.0000
68 R I -0.6159
69 T I 0.0000
70 T I -0.3168
71 C I 0.0000
72 P I -1.2476
73 K I -1.8454
74 S I -1.1209
75 S I -1.1878
76 G I -1.6402
77 D I -2.3778
78 L I -1.4269
79 Q I -1.5016
80 S I -1.0354
81 C I -1.1169
82 E I -0.7993
83 F I 0.3873
84 H I -1.2822
85 D I -1.6209
86 E I -2.2255
87 P I -1.8254
88 E I -2.5025
89 M I -0.8639
90 A I -0.5944
91 K I -1.0061
92 Y I 0.5179
93 T I 0.0000
94 T I -0.5005
95 C I 0.0000
96 T I -1.0260
97 F I 0.0000
98 V I 0.0000
99 V I 0.0000
100 Y I -0.1193
101 S I 0.0000
102 I I 0.0646
103 P I 0.2352
104 W I 1.2725
105 L I 1.2110
106 N I -0.5628
107 Q I -1.0857
108 I I -0.7671
109 K I -1.4193
110 L I -0.6577
111 L I -0.4980
112 E I -1.9100
113 S I -1.4747
114 K I -2.2448
115 C I -1.0200
116 Q I -1.2126
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Laboratory of Theory of Biopolymers 2018