| Chain sequence(s) |
L: KVIAFTDGTALADIAD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 205 | K | L | -1.5472 | |
| 206 | V | L | 1.8494 | |
| 207 | I | L | 2.3624 | |
| 208 | A | L | 0.4761 | |
| 209 | F | L | 0.2967 | |
| 210 | T | L | -0.3425 | |
| 211 | D | L | -1.8857 | |
| 212 | G | L | -0.7995 | |
| 213 | T | L | -0.1453 | |
| 214 | A | L | 0.4800 | |
| 215 | L | L | 1.5002 | |
| 216 | A | L | 0.1796 | |
| 217 | D | L | -0.2822 | |
| 218 | I | L | 0.2998 | |
| 219 | A | L | -0.1697 | |
| 220 | D | L | -2.0026 |