| Chain sequence(s) |
A: CCAEAEAKAKAEAEAKAK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:29)
[INFO] Main: Simulation completed successfully. (00:00:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.3855 | |
| 2 | C | A | 0.1323 | |
| 3 | A | A | -1.0656 | |
| 4 | E | A | -2.5275 | |
| 5 | A | A | -2.0537 | |
| 6 | E | A | -3.2007 | |
| 7 | A | A | -2.9577 | |
| 8 | K | A | -3.8786 | |
| 9 | A | A | -3.3093 | |
| 10 | K | A | -3.8685 | |
| 11 | A | A | -3.3056 | |
| 12 | E | A | -3.8997 | |
| 13 | A | A | -3.2702 | |
| 14 | E | A | -3.8575 | |
| 15 | A | A | -2.9804 | |
| 16 | K | A | -3.1723 | |
| 17 | A | A | -2.4154 | |
| 18 | K | A | -2.5986 |