| Chain sequence(s) |
A: FKFEKGH
C: FKFEKGH B: FKFEKGH E: FKFEKGH D: FKFEKGH G: FKFEKGH F: FKFEKGH I: FKFEKGH H: FKFEKGH K: FKFEKGH J: FKFEKGH M: FKFEKGH L: FKFEKGH O: FKFEKGH N: FKFEKGH Q: FKFEKGH P: FKFEKGH S: FKFEKGH R: FKFEKGH T: FKFEKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:15:52)
[INFO] Main: Simulation completed successfully. (00:15:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.1681 | |
| 2 | K | A | -0.2757 | |
| 3 | F | A | -0.6593 | |
| 4 | E | A | -2.1799 | |
| 5 | K | A | -3.2877 | |
| 6 | G | A | -2.6630 | |
| 7 | H | A | -2.1429 | |
| 1 | F | B | 0.0000 | |
| 2 | K | B | -0.8213 | |
| 3 | F | B | 0.0000 | |
| 4 | E | B | -2.7565 | |
| 5 | K | B | -3.1354 | |
| 6 | G | B | -2.4850 | |
| 7 | H | B | -2.2805 | |
| 1 | F | C | 0.4677 | |
| 2 | K | C | -1.1942 | |
| 3 | F | C | -1.8045 | |
| 4 | E | C | -2.8805 | |
| 5 | K | C | -3.2573 | |
| 6 | G | C | -2.5679 | |
| 7 | H | C | -2.2025 | |
| 1 | F | D | 0.4605 | |
| 2 | K | D | -1.5464 | |
| 3 | F | D | -2.1338 | |
| 4 | E | D | -3.5337 | |
| 5 | K | D | -3.5920 | |
| 6 | G | D | -2.8343 | |
| 7 | H | D | -2.2471 | |
| 1 | F | E | 0.5573 | |
| 2 | K | E | -1.5249 | |
| 3 | F | E | -1.5834 | |
| 4 | E | E | -3.2410 | |
| 5 | K | E | -3.7920 | |
| 6 | G | E | -2.9216 | |
| 7 | H | E | -2.4061 | |
| 1 | F | F | 0.4965 | |
| 2 | K | F | -1.0898 | |
| 3 | F | F | -1.1700 | |
| 4 | E | F | -2.8214 | |
| 5 | K | F | -3.5057 | |
| 6 | G | F | -2.7193 | |
| 7 | H | F | -2.1485 | |
| 1 | F | G | 0.3956 | |
| 2 | K | G | -1.1064 | |
| 3 | F | G | -1.1463 | |
| 4 | E | G | -2.4347 | |
| 5 | K | G | -3.1753 | |
| 6 | G | G | -2.1699 | |
| 7 | H | G | -2.0195 | |
| 1 | F | H | 0.1112 | |
| 2 | K | H | -1.2413 | |
| 3 | F | H | -1.5172 | |
| 4 | E | H | -2.6421 | |
| 5 | K | H | -2.7599 | |
| 6 | G | H | -2.4362 | |
| 7 | H | H | -1.9238 | |
| 1 | F | I | -0.2831 | |
| 2 | K | I | -1.8468 | |
| 3 | F | I | -2.1167 | |
| 4 | E | I | -3.0150 | |
| 5 | K | I | -3.2449 | |
| 6 | G | I | -2.6631 | |
| 7 | H | I | -2.1221 | |
| 1 | F | J | -0.5113 | |
| 2 | K | J | -2.5397 | |
| 3 | F | J | -2.3408 | |
| 4 | E | J | -3.3138 | |
| 5 | K | J | -3.0026 | |
| 6 | G | J | -2.5341 | |
| 7 | H | J | -2.1625 | |
| 1 | F | K | -0.4492 | |
| 2 | K | K | -2.1291 | |
| 3 | F | K | -2.2789 | |
| 4 | E | K | -3.2758 | |
| 5 | K | K | -3.0553 | |
| 6 | G | K | -2.5839 | |
| 7 | H | K | -2.1047 | |
| 1 | F | L | -0.2624 | |
| 2 | K | L | -2.2880 | |
| 3 | F | L | -1.7099 | |
| 4 | E | L | -3.0520 | |
| 5 | K | L | -3.1582 | |
| 6 | G | L | -2.5610 | |
| 7 | H | L | -2.2648 | |
| 1 | F | M | 0.2989 | |
| 2 | K | M | -1.4526 | |
| 3 | F | M | -1.6739 | |
| 4 | E | M | -3.0146 | |
| 5 | K | M | -3.2109 | |
| 6 | G | M | -2.8270 | |
| 7 | H | M | -2.1059 | |
| 1 | F | N | 0.1712 | |
| 2 | K | N | -1.4627 | |
| 3 | F | N | -1.6022 | |
| 4 | E | N | -3.2295 | |
| 5 | K | N | -3.9473 | |
| 6 | G | N | -2.9198 | |
| 7 | H | N | -2.3388 | |
| 1 | F | O | 0.3731 | |
| 2 | K | O | -1.3120 | |
| 3 | F | O | -1.3673 | |
| 4 | E | O | -2.8742 | |
| 5 | K | O | -3.6067 | |
| 6 | G | O | -2.9234 | |
| 7 | H | O | -2.1267 | |
| 1 | F | P | 0.5500 | |
| 2 | K | P | -0.7019 | |
| 3 | F | P | -1.1181 | |
| 4 | E | P | -2.7755 | |
| 5 | K | P | -3.3316 | |
| 6 | G | P | -2.6408 | |
| 7 | H | P | -1.9455 | |
| 1 | F | Q | 0.3911 | |
| 2 | K | Q | -1.1630 | |
| 3 | F | Q | -1.6150 | |
| 4 | E | Q | -3.0089 | |
| 5 | K | Q | -3.6848 | |
| 6 | G | Q | -2.8635 | |
| 7 | H | Q | -2.1579 | |
| 1 | F | R | 0.3474 | |
| 2 | K | R | -1.5200 | |
| 3 | F | R | -1.8038 | |
| 4 | E | R | -3.1241 | |
| 5 | K | R | -3.8559 | |
| 6 | G | R | -3.0016 | |
| 7 | H | R | -2.2343 | |
| 1 | F | S | 0.0074 | |
| 2 | K | S | -2.0074 | |
| 3 | F | S | -2.1629 | |
| 4 | E | S | -3.5641 | |
| 5 | K | S | -4.2405 | |
| 6 | G | S | -3.2264 | |
| 7 | H | S | -2.4509 | |
| 1 | F | T | 0.0000 | |
| 2 | K | T | -2.2065 | |
| 3 | F | T | -2.2666 | |
| 4 | E | T | -3.5353 | |
| 5 | K | T | -3.6502 | |
| 6 | G | T | -2.6887 | |
| 7 | H | T | -2.0675 |