Project name: query_structure

Status: done

Started: 2026-03-16 21:43:06
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Chain sequence(s) A: MLPAPKNLVVSRVTEDSARLSWEGYRNNAHFDSFLIQYQESEKVGEAIVLTVPGSERSYDLTGLKPGTEYTVSIYGVVAAVPRNYYSNPLSAIFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:56)
Show buried residues

Minimal score value
-3.2662
Maximal score value
1.9476
Average score
-0.7182
Total score value
-68.9508

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.3930
2 L A 1.1814
3 P A 0.0308
4 A A -0.4315
5 P A 0.0000
6 K A -2.5283
7 N A -1.4737
8 L A -0.3621
9 V A 0.9510
10 V A 0.7553
11 S A -0.6037
12 R A -1.8810
13 V A -1.0952
14 T A -1.8393
15 E A -3.1237
16 D A -2.7730
17 S A -2.0736
18 A A 0.0000
19 R A -1.1610
20 L A 0.0000
21 S A -0.7158
22 W A 0.0000
23 E A -3.1245
24 G A -2.7035
25 Y A -1.8122
26 R A -3.2662
27 N A -2.9865
28 N A -2.7039
29 A A -2.0249
30 H A -2.2320
31 F A 0.0000
32 D A -2.0946
33 S A -1.1721
34 F A 0.0000
35 L A 0.7150
36 I A 0.0000
37 Q A 0.6346
38 Y A 0.3830
39 Q A -0.9678
40 E A -2.1196
41 S A -1.5976
42 E A -2.7825
43 K A -2.4773
44 V A -0.1484
45 G A -1.0671
46 E A -1.4394
47 A A -0.1798
48 I A 1.2039
49 V A 1.9476
50 L A 1.3313
51 T A 0.3143
52 V A 0.0000
53 P A -1.1912
54 G A 0.0000
55 S A -1.5127
56 E A -1.8134
57 R A -1.9254
58 S A -1.1120
59 Y A -0.7941
60 D A -1.4727
61 L A 0.0000
62 T A -1.3000
63 G A -1.5100
64 L A 0.0000
65 K A -3.0857
66 P A -2.5942
67 G A -1.8142
68 T A 0.0000
69 E A -1.7971
70 Y A 0.0000
71 T A -0.0564
72 V A 0.0000
73 S A 0.4235
74 I A 0.0000
75 Y A 0.4823
76 G A 0.0000
77 V A 0.0000
78 V A -0.3206
79 A A -0.5120
80 A A -0.1961
81 V A 0.8458
82 P A -0.2728
83 R A -1.6348
84 N A -1.3423
85 Y A 0.4520
86 Y A 1.2079
87 S A 0.0000
88 N A -0.0820
89 P A -0.2688
90 L A -0.4329
91 S A 0.3036
92 A A 1.2531
93 I A 1.8335
94 F A 0.0000
95 T A -0.6865
96 T A -1.9040
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Laboratory of Theory of Biopolymers 2018