| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWEGYRNNAHFDSFLIQYQESEKVGEAIVLTVPGSERSYDLTGLKPGTEYTVSIYGVVAAVPRNYYSNPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:55)
[INFO] Main: Simulation completed successfully. (00:01:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.3930 | |
| 2 | L | A | 1.1814 | |
| 3 | P | A | 0.0308 | |
| 4 | A | A | -0.4315 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.5283 | |
| 7 | N | A | -1.4737 | |
| 8 | L | A | -0.3621 | |
| 9 | V | A | 0.9510 | |
| 10 | V | A | 0.7553 | |
| 11 | S | A | -0.6037 | |
| 12 | R | A | -1.8810 | |
| 13 | V | A | -1.0952 | |
| 14 | T | A | -1.8393 | |
| 15 | E | A | -3.1237 | |
| 16 | D | A | -2.7730 | |
| 17 | S | A | -2.0736 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.1610 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.7158 | |
| 22 | W | A | 0.0000 | |
| 23 | E | A | -3.1245 | |
| 24 | G | A | -2.7035 | |
| 25 | Y | A | -1.8122 | |
| 26 | R | A | -3.2662 | |
| 27 | N | A | -2.9865 | |
| 28 | N | A | -2.7039 | |
| 29 | A | A | -2.0249 | |
| 30 | H | A | -2.2320 | |
| 31 | F | A | 0.0000 | |
| 32 | D | A | -2.0946 | |
| 33 | S | A | -1.1721 | |
| 34 | F | A | 0.0000 | |
| 35 | L | A | 0.7150 | |
| 36 | I | A | 0.0000 | |
| 37 | Q | A | 0.6346 | |
| 38 | Y | A | 0.3830 | |
| 39 | Q | A | -0.9678 | |
| 40 | E | A | -2.1196 | |
| 41 | S | A | -1.5976 | |
| 42 | E | A | -2.7825 | |
| 43 | K | A | -2.4773 | |
| 44 | V | A | -0.1484 | |
| 45 | G | A | -1.0671 | |
| 46 | E | A | -1.4394 | |
| 47 | A | A | -0.1798 | |
| 48 | I | A | 1.2039 | |
| 49 | V | A | 1.9476 | |
| 50 | L | A | 1.3313 | |
| 51 | T | A | 0.3143 | |
| 52 | V | A | 0.0000 | |
| 53 | P | A | -1.1912 | |
| 54 | G | A | 0.0000 | |
| 55 | S | A | -1.5127 | |
| 56 | E | A | -1.8134 | |
| 57 | R | A | -1.9254 | |
| 58 | S | A | -1.1120 | |
| 59 | Y | A | -0.7941 | |
| 60 | D | A | -1.4727 | |
| 61 | L | A | 0.0000 | |
| 62 | T | A | -1.3000 | |
| 63 | G | A | -1.5100 | |
| 64 | L | A | 0.0000 | |
| 65 | K | A | -3.0857 | |
| 66 | P | A | -2.5942 | |
| 67 | G | A | -1.8142 | |
| 68 | T | A | 0.0000 | |
| 69 | E | A | -1.7971 | |
| 70 | Y | A | 0.0000 | |
| 71 | T | A | -0.0564 | |
| 72 | V | A | 0.0000 | |
| 73 | S | A | 0.4235 | |
| 74 | I | A | 0.0000 | |
| 75 | Y | A | 0.4823 | |
| 76 | G | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | V | A | -0.3206 | |
| 79 | A | A | -0.5120 | |
| 80 | A | A | -0.1961 | |
| 81 | V | A | 0.8458 | |
| 82 | P | A | -0.2728 | |
| 83 | R | A | -1.6348 | |
| 84 | N | A | -1.3423 | |
| 85 | Y | A | 0.4520 | |
| 86 | Y | A | 1.2079 | |
| 87 | S | A | 0.0000 | |
| 88 | N | A | -0.0820 | |
| 89 | P | A | -0.2688 | |
| 90 | L | A | -0.4329 | |
| 91 | S | A | 0.3036 | |
| 92 | A | A | 1.2531 | |
| 93 | I | A | 1.8335 | |
| 94 | F | A | 0.0000 | |
| 95 | T | A | -0.6865 | |
| 96 | T | A | -1.9040 |