| Chain sequence(s) |
A: GPLPLNPGPPLLPTSSYVEPTDLYYVAETDLITEEGDPTKDIIENGKVKVPKVSAYDYKVFLLTLPDPNKMPLPSEDFFDPATERLIWRLEAYYIGVYGPLGKGSVGHPNFNALGDVTNPTKYVKETKDVTQNLSWRPKLKQEYIIGDEPPIGKYIDIAEPEPGLPPGAIPPTKEVLDLIEHGDKADIGFGAKDYAKLEPSKNNVPEDILDTKTKEIDYEGMKAEPTGRRMFDYDKKESSSDSKNYVKSGKDLIPLPDTPPPSKLYTKPKPSSPYYKLPSYNYFTLPDEGAITEADLIFNKPVFIEKTPGLNDGILWHNRLYITVLDNTRAAVETIETQLSTPEENVYDPSNYKTSKRYTRQYKLSLIVRLCRIPLTPETLALLERIDPSILVEWELPFVPPVERPDPYAGKKFIEIDLTDKFSSDLSKYELGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2009 | |
| 2 | P | A | 0.4254 | |
| 3 | L | A | 1.3903 | |
| 4 | P | A | 0.7117 | |
| 5 | L | A | 0.9946 | |
| 6 | N | A | -0.6063 | |
| 7 | P | A | -0.7114 | |
| 8 | G | A | -0.7014 | |
| 9 | P | A | -0.5301 | |
| 10 | P | A | -0.0622 | |
| 11 | L | A | 0.5687 | |
| 12 | L | A | 1.2414 | |
| 13 | P | A | 0.5053 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -0.4784 | |
| 16 | S | A | -0.2532 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | E | A | -1.8067 | |
| 20 | P | A | -1.4794 | |
| 21 | T | A | 0.0000 | |
| 22 | D | A | -1.6495 | |
| 23 | L | A | -0.5430 | |
| 24 | Y | A | -0.2785 | |
| 25 | Y | A | 0.0000 | |
| 26 | V | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.0365 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.4041 | |
| 31 | L | A | 0.2484 | |
| 32 | I | A | 0.1802 | |
| 33 | T | A | -0.1924 | |
| 34 | E | A | -0.5853 | |
| 35 | E | A | -0.8391 | |
| 36 | G | A | 0.0000 | |
| 37 | D | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.6389 | |
| 40 | K | A | -2.0790 | |
| 41 | D | A | -1.3766 | |
| 42 | I | A | 0.0800 | |
| 43 | I | A | 0.4184 | |
| 44 | E | A | -1.6338 | |
| 45 | N | A | -2.1779 | |
| 46 | G | A | -1.5337 | |
| 47 | K | A | -1.7123 | |
| 48 | V | A | 0.0176 | |
| 49 | K | A | -1.1907 | |
| 50 | V | A | -0.4930 | |
| 51 | P | A | -0.7034 | |
| 52 | K | A | -1.5682 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.2475 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.2389 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3962 | |
| 70 | K | A | -1.9784 | |
| 71 | M | A | -0.9684 | |
| 72 | P | A | -0.7281 | |
| 73 | L | A | -0.6443 | |
| 74 | P | A | -0.6971 | |
| 75 | S | A | -1.5219 | |
| 76 | E | A | -2.7867 | |
| 77 | D | A | -2.7909 | |
| 78 | F | A | -1.4205 | |
| 79 | F | A | -1.4270 | |
| 80 | D | A | -1.9345 | |
| 81 | P | A | -1.1193 | |
| 82 | A | A | -0.5764 | |
| 83 | T | A | -0.6384 | |
| 84 | E | A | -0.9308 | |
| 85 | R | A | -0.7353 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.4799 | |
| 90 | L | A | 0.0000 | |
| 91 | E | A | 0.0000 | |
| 92 | A | A | 0.0000 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.5083 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | 0.0000 | |
| 97 | V | A | 0.0000 | |
| 98 | Y | A | 0.2222 | |
| 99 | G | A | -0.2253 | |
| 100 | P | A | -0.1771 | |
| 101 | L | A | -0.0521 | |
| 102 | G | A | -0.3984 | |
| 103 | K | A | -1.2976 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.7017 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.9483 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.6568 | |
| 110 | N | A | -2.4765 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.3649 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -0.9919 | |
| 117 | V | A | -0.3970 | |
| 118 | T | A | -1.0778 | |
| 119 | N | A | -1.8425 | |
| 120 | P | A | -1.2374 | |
| 121 | T | A | -1.2207 | |
| 122 | K | A | -1.8680 | |
| 123 | Y | A | -0.6083 | |
| 124 | V | A | -0.9877 | |
| 125 | K | A | -2.3821 | |
| 126 | E | A | -2.7424 | |
| 127 | T | A | -2.3423 | |
| 128 | K | A | -2.8143 | |
| 129 | D | A | -2.9122 | |
| 130 | V | A | -1.9143 | |
| 131 | T | A | -1.7271 | |
| 132 | Q | A | -1.8133 | |
| 133 | N | A | -1.9934 | |
| 134 | L | A | -1.0211 | |
| 135 | S | A | -0.6922 | |
| 136 | W | A | 0.0000 | |
| 137 | R | A | -1.3305 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | -1.0062 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | -0.3771 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | I | A | 0.2042 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.6013 | |
| 155 | Y | A | 0.0000 | |
| 156 | I | A | -0.6218 | |
| 157 | D | A | 0.0000 | |
| 158 | I | A | -0.6038 | |
| 159 | A | A | -1.5344 | |
| 160 | E | A | -2.4869 | |
| 161 | P | A | -1.7162 | |
| 162 | E | A | -2.4290 | |
| 163 | P | A | -1.4484 | |
| 164 | G | A | -0.7586 | |
| 165 | L | A | 0.1265 | |
| 166 | P | A | 0.0265 | |
| 167 | P | A | -0.1960 | |
| 168 | G | A | 0.2189 | |
| 169 | A | A | 1.0351 | |
| 170 | I | A | 2.1997 | |
| 171 | P | A | 0.3631 | |
| 172 | P | A | -0.4971 | |
| 173 | T | A | -0.7943 | |
| 174 | K | A | -1.9321 | |
| 175 | E | A | -1.8453 | |
| 176 | V | A | -0.2808 | |
| 177 | L | A | 0.7585 | |
| 178 | D | A | 0.0471 | |
| 179 | L | A | 0.0747 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.1137 | |
| 182 | H | A | -1.0178 | |
| 183 | G | A | -0.8341 | |
| 184 | D | A | -1.0418 | |
| 185 | K | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.7210 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.3447 | |
| 190 | F | A | -0.0505 | |
| 191 | G | A | -0.3159 | |
| 192 | A | A | -0.9578 | |
| 193 | K | A | -1.3582 | |
| 194 | D | A | 0.0000 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -2.2270 | |
| 197 | K | A | -2.3268 | |
| 198 | L | A | -1.0592 | |
| 199 | E | A | -1.7984 | |
| 200 | P | A | -1.6687 | |
| 201 | S | A | -1.5075 | |
| 202 | K | A | -2.8195 | |
| 203 | N | A | -1.8735 | |
| 204 | N | A | -1.2486 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | E | A | -1.8243 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.5814 | |
| 211 | D | A | -2.6316 | |
| 212 | T | A | -1.7366 | |
| 213 | K | A | -1.8437 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | E | A | -1.1079 | |
| 217 | I | A | 0.0000 | |
| 218 | D | A | -1.0141 | |
| 219 | Y | A | -1.4956 | |
| 220 | E | A | -2.5139 | |
| 221 | G | A | -1.5269 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.5418 | |
| 224 | A | A | -1.5502 | |
| 225 | E | A | -1.2802 | |
| 226 | P | A | -0.4341 | |
| 227 | T | A | -0.1436 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.5852 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -0.5823 | |
| 234 | Y | A | -0.5723 | |
| 235 | D | A | -1.5009 | |
| 236 | K | A | -2.2124 | |
| 237 | K | A | -2.1592 | |
| 238 | E | A | -1.9855 | |
| 239 | S | A | -1.0462 | |
| 240 | S | A | -1.2042 | |
| 241 | S | A | -1.4069 | |
| 242 | D | A | -2.4600 | |
| 243 | S | A | -1.8109 | |
| 244 | K | A | -2.0633 | |
| 245 | N | A | -1.2108 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | K | A | 0.0000 | |
| 249 | S | A | -1.6814 | |
| 250 | G | A | -1.5854 | |
| 251 | K | A | -1.5985 | |
| 252 | D | A | -0.1586 | |
| 253 | L | A | 2.0150 | |
| 254 | I | A | 2.3191 | |
| 255 | P | A | 0.6588 | |
| 256 | L | A | 0.7704 | |
| 257 | P | A | -0.5804 | |
| 258 | D | A | -2.0508 | |
| 259 | T | A | -1.3573 | |
| 260 | P | A | -0.9734 | |
| 261 | P | A | -0.9386 | |
| 262 | P | A | -0.7595 | |
| 263 | S | A | -0.9023 | |
| 264 | K | A | -1.0475 | |
| 265 | L | A | 0.7841 | |
| 266 | Y | A | 0.1540 | |
| 267 | T | A | -0.3431 | |
| 268 | K | A | -0.9474 | |
| 269 | P | A | -0.8772 | |
| 270 | K | A | -1.7230 | |
| 271 | P | A | -1.1843 | |
| 272 | S | A | -0.7050 | |
| 273 | S | A | -0.6121 | |
| 274 | P | A | -0.3121 | |
| 275 | Y | A | 0.2905 | |
| 276 | Y | A | -0.2752 | |
| 277 | K | A | -1.3715 | |
| 278 | L | A | -0.5365 | |
| 279 | P | A | -0.6057 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.0951 | |
| 282 | N | A | -0.6101 | |
| 283 | Y | A | 0.9138 | |
| 284 | F | A | 0.4076 | |
| 285 | T | A | -0.5798 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | 0.0000 | |
| 289 | E | A | 0.0000 | |
| 290 | G | A | -0.6932 | |
| 291 | A | A | -0.1802 | |
| 292 | I | A | -0.4300 | |
| 293 | T | A | -0.8917 | |
| 294 | E | A | -1.8487 | |
| 295 | A | A | -1.1149 | |
| 296 | D | A | -1.2482 | |
| 297 | L | A | 0.0000 | |
| 298 | I | A | -1.1056 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.1531 | |
| 301 | K | A | -1.6977 | |
| 302 | P | A | -0.6890 | |
| 303 | V | A | -0.0378 | |
| 304 | F | A | -0.1866 | |
| 305 | I | A | -1.0040 | |
| 306 | E | A | -2.4406 | |
| 307 | K | A | -2.6388 | |
| 308 | T | A | 0.0000 | |
| 309 | P | A | -1.0094 | |
| 310 | G | A | -0.8689 | |
| 311 | L | A | 0.2167 | |
| 312 | N | A | 0.0000 | |
| 313 | D | A | -1.0811 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.5605 | |
| 319 | N | A | -0.5808 | |
| 320 | R | A | -0.7973 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | A | A | -0.6847 | |
| 333 | V | A | -0.9720 | |
| 334 | E | A | -2.1944 | |
| 335 | T | A | -1.5152 | |
| 336 | I | A | -1.0336 | |
| 337 | E | A | -2.2100 | |
| 338 | T | A | -1.3989 | |
| 339 | Q | A | -1.3419 | |
| 340 | L | A | 0.2656 | |
| 341 | S | A | -0.1882 | |
| 342 | T | A | -0.7410 | |
| 343 | P | A | -1.3440 | |
| 344 | E | A | -2.5551 | |
| 345 | E | A | -2.7224 | |
| 346 | N | A | -1.7005 | |
| 347 | V | A | 0.0808 | |
| 348 | Y | A | 0.6540 | |
| 349 | D | A | -0.3638 | |
| 350 | P | A | -0.4959 | |
| 351 | S | A | -0.6158 | |
| 352 | N | A | -0.8476 | |
| 353 | Y | A | -1.1039 | |
| 354 | K | A | -2.0441 | |
| 355 | T | A | -1.8976 | |
| 356 | S | A | -1.8038 | |
| 357 | K | A | -2.6388 | |
| 358 | R | A | -2.0123 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.7159 | |
| 361 | R | A | 0.0000 | |
| 362 | Q | A | -0.1348 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.5361 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | R | A | -0.5286 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -1.1810 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.8406 | |
| 376 | L | A | -0.4911 | |
| 377 | T | A | -0.6817 | |
| 378 | P | A | -1.0346 | |
| 379 | E | A | -1.8441 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -0.8578 | |
| 382 | A | A | -1.1644 | |
| 383 | L | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | E | A | -1.7081 | |
| 386 | R | A | -1.3278 | |
| 387 | I | A | -0.6001 | |
| 388 | D | A | -0.8712 | |
| 389 | P | A | -0.9974 | |
| 390 | S | A | -0.7748 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.6044 | |
| 394 | E | A | -1.2317 | |
| 395 | W | A | -1.1760 | |
| 396 | E | A | -1.4838 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.2959 | |
| 399 | F | A | 1.6206 | |
| 400 | V | A | 0.8104 | |
| 401 | P | A | 0.2693 | |
| 402 | P | A | -0.1229 | |
| 403 | V | A | 0.3345 | |
| 404 | E | A | -1.5375 | |
| 405 | R | A | -1.5082 | |
| 406 | P | A | -1.2808 | |
| 407 | D | A | -1.5274 | |
| 408 | P | A | -0.9140 | |
| 409 | Y | A | -0.8523 | |
| 410 | A | A | -0.9807 | |
| 411 | G | A | -1.2586 | |
| 412 | K | A | -1.7867 | |
| 413 | K | A | -2.4073 | |
| 414 | F | A | -1.3479 | |
| 415 | I | A | -1.0548 | |
| 416 | E | A | -2.1703 | |
| 417 | I | A | -1.6928 | |
| 418 | D | A | -2.6224 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.7573 | |
| 421 | D | A | -2.5543 | |
| 422 | K | A | -2.3396 | |
| 423 | F | A | -0.9544 | |
| 424 | S | A | -0.9739 | |
| 425 | S | A | -0.6287 | |
| 426 | D | A | -1.3996 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.7016 | |
| 429 | K | A | -2.5352 | |
| 430 | Y | A | -1.8912 | |
| 431 | E | A | -2.3280 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.8940 | |
| 435 | L | A | -0.5284 | |
| 436 | Y | A | -0.2030 | |
| 437 | L | A | 0.1951 | |
| 438 | N | A | -1.4605 | |
| 439 | R | A | -1.8438 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine