| Chain sequence(s) |
A: MSHHHHHHSGSMMGWSLDLEYNVETKEITIKDEHSKEMLKKEGFGDEETFLGALKEVLDILLGNFDENITNEEKFEKAKAEAKKILEKLGYEMEAWFYQDESIPSDKGYMLQLWIKHKGVWYAIFVDIKKEENS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:35)
[INFO] Main: Simulation completed successfully. (00:03:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5636 | |
| 2 | S | A | -0.6173 | |
| 3 | H | A | -1.7410 | |
| 4 | H | A | -2.3399 | |
| 5 | H | A | -2.7412 | |
| 6 | H | A | -2.7445 | |
| 7 | H | A | -2.5643 | |
| 8 | H | A | -2.1783 | |
| 9 | S | A | -1.3132 | |
| 10 | G | A | -0.8586 | |
| 11 | S | A | 0.2658 | |
| 12 | M | A | 1.4086 | |
| 13 | M | A | 1.5775 | |
| 14 | G | A | 0.9954 | |
| 15 | W | A | 0.9009 | |
| 16 | S | A | 0.2236 | |
| 17 | L | A | 0.0000 | |
| 18 | D | A | -1.5111 | |
| 19 | L | A | 0.0000 | |
| 20 | E | A | -1.2079 | |
| 21 | Y | A | 0.0000 | |
| 22 | N | A | -2.6576 | |
| 23 | V | A | -2.8017 | |
| 24 | E | A | -3.5879 | |
| 25 | T | A | -2.5160 | |
| 26 | K | A | -3.3962 | |
| 27 | E | A | -2.8958 | |
| 28 | I | A | -1.4013 | |
| 29 | T | A | -1.0380 | |
| 30 | I | A | -1.6001 | |
| 31 | K | A | -2.6834 | |
| 32 | D | A | -3.2175 | |
| 33 | E | A | -4.0085 | |
| 34 | H | A | -3.4117 | |
| 35 | S | A | 0.0000 | |
| 36 | K | A | -4.5315 | |
| 37 | E | A | -4.6291 | |
| 38 | M | A | 0.0000 | |
| 39 | L | A | 0.0000 | |
| 40 | K | A | -4.2859 | |
| 41 | K | A | -3.5305 | |
| 42 | E | A | -2.4669 | |
| 43 | G | A | -2.2934 | |
| 44 | F | A | 0.0000 | |
| 45 | G | A | -2.3392 | |
| 46 | D | A | -3.5876 | |
| 47 | E | A | -3.8400 | |
| 48 | E | A | -3.2205 | |
| 49 | T | A | -2.1954 | |
| 50 | F | A | 0.0000 | |
| 51 | L | A | -1.7686 | |
| 52 | G | A | -1.9401 | |
| 53 | A | A | 0.0000 | |
| 54 | L | A | 0.0000 | |
| 55 | K | A | -2.6538 | |
| 56 | E | A | -2.8928 | |
| 57 | V | A | 0.0000 | |
| 58 | L | A | 0.0000 | |
| 59 | D | A | -2.3366 | |
| 60 | I | A | -1.4309 | |
| 61 | L | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | G | A | -1.9902 | |
| 64 | N | A | -2.4627 | |
| 65 | F | A | 0.0000 | |
| 66 | D | A | -2.3486 | |
| 67 | E | A | -2.8240 | |
| 68 | N | A | 0.0000 | |
| 69 | I | A | -1.1710 | |
| 70 | T | A | -1.6731 | |
| 71 | N | A | -2.9890 | |
| 72 | E | A | -4.1474 | |
| 73 | E | A | -4.4993 | |
| 74 | K | A | -4.3564 | |
| 75 | F | A | 0.0000 | |
| 76 | E | A | -4.3452 | |
| 77 | K | A | -4.1932 | |
| 78 | A | A | -3.0080 | |
| 79 | K | A | 0.0000 | |
| 80 | A | A | -2.6521 | |
| 81 | E | A | -3.2741 | |
| 82 | A | A | 0.0000 | |
| 83 | K | A | -3.2678 | |
| 84 | K | A | -3.7294 | |
| 85 | I | A | -2.6940 | |
| 86 | L | A | 0.0000 | |
| 87 | E | A | -3.8615 | |
| 88 | K | A | -3.1019 | |
| 89 | L | A | -1.6428 | |
| 90 | G | A | -2.3407 | |
| 91 | Y | A | 0.0000 | |
| 92 | E | A | -3.0454 | |
| 93 | M | A | 0.0000 | |
| 94 | E | A | -0.6048 | |
| 95 | A | A | 0.0000 | |
| 96 | W | A | 1.0514 | |
| 97 | F | A | 1.1096 | |
| 98 | Y | A | 0.6747 | |
| 99 | Q | A | -1.4381 | |
| 100 | D | A | -2.2196 | |
| 101 | E | A | -2.9243 | |
| 102 | S | A | -1.4570 | |
| 103 | I | A | -1.3273 | |
| 104 | P | A | -1.2287 | |
| 105 | S | A | -2.0415 | |
| 106 | D | A | -2.8176 | |
| 107 | K | A | -2.6624 | |
| 108 | G | A | 0.0000 | |
| 109 | Y | A | -1.1268 | |
| 110 | M | A | 0.1150 | |
| 111 | L | A | 0.0000 | |
| 112 | Q | A | 0.5936 | |
| 113 | L | A | 0.0000 | |
| 114 | W | A | -0.0808 | |
| 115 | I | A | 0.0000 | |
| 116 | K | A | -1.5543 | |
| 117 | H | A | 0.0000 | |
| 118 | K | A | -2.1808 | |
| 119 | G | A | -0.9891 | |
| 120 | V | A | -0.1133 | |
| 121 | W | A | 0.1177 | |
| 122 | Y | A | 0.0000 | |
| 123 | A | A | 0.0000 | |
| 124 | I | A | 0.0000 | |
| 125 | F | A | 0.2519 | |
| 126 | V | A | 0.0000 | |
| 127 | D | A | 0.0000 | |
| 128 | I | A | 0.0000 | |
| 129 | K | A | -2.8400 | |
| 130 | K | A | -3.6927 | |
| 131 | E | A | -4.2958 | |
| 132 | E | A | -3.9274 | |
| 133 | N | A | -2.9017 | |
| 134 | S | A | -1.6611 |