| Chain sequence(s) |
A: MSHHHHHHSGMEKSPAEKMREIIERKKKEVEEYIKNHPEISEETKQYFEHMFRGMESLIWPEEPEITRFSFEVHYRNFERTKEFMLTDPDAKPWYEKNKELFELIDEAIEEVMKVVKEELGLNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:31)
[INFO] Main: Simulation completed successfully. (00:06:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5528 | |
| 2 | S | A | -0.6195 | |
| 3 | H | A | -1.7452 | |
| 4 | H | A | -2.3418 | |
| 5 | H | A | -2.7598 | |
| 6 | H | A | -2.7681 | |
| 7 | H | A | -2.5873 | |
| 8 | H | A | -2.0286 | |
| 9 | S | A | -1.3671 | |
| 10 | G | A | -1.2676 | |
| 11 | M | A | -0.6387 | |
| 12 | E | A | -2.3002 | |
| 13 | K | A | -2.6141 | |
| 14 | S | A | -1.9905 | |
| 15 | P | A | -2.1182 | |
| 16 | A | A | 0.0000 | |
| 17 | E | A | -3.2166 | |
| 18 | K | A | -3.0071 | |
| 19 | M | A | 0.0000 | |
| 20 | R | A | -4.0078 | |
| 21 | E | A | -3.8367 | |
| 22 | I | A | -2.6083 | |
| 23 | I | A | 0.0000 | |
| 24 | E | A | -4.1430 | |
| 25 | R | A | -3.1673 | |
| 26 | K | A | 0.0000 | |
| 27 | K | A | -3.2305 | |
| 28 | K | A | -3.8292 | |
| 29 | E | A | -3.2754 | |
| 30 | V | A | 0.0000 | |
| 31 | E | A | -3.6660 | |
| 32 | E | A | -3.9618 | |
| 33 | Y | A | -2.6389 | |
| 34 | I | A | 0.0000 | |
| 35 | K | A | -3.6038 | |
| 36 | N | A | -2.9960 | |
| 37 | H | A | -2.3171 | |
| 38 | P | A | -2.1266 | |
| 39 | E | A | -2.4744 | |
| 40 | I | A | -2.1547 | |
| 41 | S | A | -2.2575 | |
| 42 | E | A | -3.3688 | |
| 43 | E | A | -3.2113 | |
| 44 | T | A | 0.0000 | |
| 45 | K | A | -2.7921 | |
| 46 | Q | A | -2.8023 | |
| 47 | Y | A | -1.7905 | |
| 48 | F | A | 0.0000 | |
| 49 | E | A | -2.3202 | |
| 50 | H | A | -2.3154 | |
| 51 | M | A | -1.5530 | |
| 52 | F | A | 0.0000 | |
| 53 | R | A | -3.1028 | |
| 54 | G | A | -1.8130 | |
| 55 | M | A | 0.0000 | |
| 56 | E | A | -2.9358 | |
| 57 | S | A | -1.3594 | |
| 58 | L | A | -0.0568 | |
| 59 | I | A | -0.7228 | |
| 60 | W | A | -0.3999 | |
| 61 | P | A | -1.2916 | |
| 62 | E | A | -2.2536 | |
| 63 | E | A | -1.8328 | |
| 64 | P | A | -1.3091 | |
| 65 | E | A | -0.8686 | |
| 66 | I | A | 0.5866 | |
| 67 | T | A | 0.0000 | |
| 68 | R | A | 0.1340 | |
| 69 | F | A | 1.8669 | |
| 70 | S | A | 1.3717 | |
| 71 | F | A | 0.0000 | |
| 72 | E | A | 0.0431 | |
| 73 | V | A | 0.8886 | |
| 74 | H | A | -0.4775 | |
| 75 | Y | A | -1.3230 | |
| 76 | R | A | -2.6801 | |
| 77 | N | A | -2.8886 | |
| 78 | F | A | 0.0000 | |
| 79 | E | A | -3.2833 | |
| 80 | R | A | -3.4471 | |
| 81 | T | A | -1.8654 | |
| 82 | K | A | -1.9991 | |
| 83 | E | A | -2.2157 | |
| 84 | F | A | -0.0968 | |
| 85 | M | A | 0.0000 | |
| 86 | L | A | -0.8036 | |
| 87 | T | A | -0.5111 | |
| 88 | D | A | -1.1394 | |
| 89 | P | A | -1.3338 | |
| 90 | D | A | -2.2128 | |
| 91 | A | A | -1.2652 | |
| 92 | K | A | -2.0607 | |
| 93 | P | A | -1.9192 | |
| 94 | W | A | -1.4756 | |
| 95 | Y | A | 0.0000 | |
| 96 | E | A | -3.1162 | |
| 97 | K | A | -2.9451 | |
| 98 | N | A | 0.0000 | |
| 99 | K | A | -2.9289 | |
| 100 | E | A | -2.7250 | |
| 101 | L | A | 0.0000 | |
| 102 | F | A | 0.0000 | |
| 103 | E | A | -2.7578 | |
| 104 | L | A | -1.9634 | |
| 105 | I | A | 0.0000 | |
| 106 | D | A | -2.2733 | |
| 107 | E | A | -2.5013 | |
| 108 | A | A | 0.0000 | |
| 109 | I | A | 0.0000 | |
| 110 | E | A | -2.5424 | |
| 111 | E | A | -2.1464 | |
| 112 | V | A | 0.0000 | |
| 113 | M | A | 0.0000 | |
| 114 | K | A | -3.3983 | |
| 115 | V | A | -2.5509 | |
| 116 | V | A | 0.0000 | |
| 117 | K | A | -3.2583 | |
| 118 | E | A | -3.3820 | |
| 119 | E | A | -2.5712 | |
| 120 | L | A | 0.0000 | |
| 121 | G | A | -1.4538 | |
| 122 | L | A | -0.1987 | |
| 123 | N | A | -1.1611 | |
| 124 | S | A | -0.5556 |