| Chain sequence(s) |
A: YVSCLFRGARCRVYSGRSCCFGYYCRRDFPGSIFGTCSRRNF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.7046 | |
| 2 | V | A | 2.1167 | |
| 3 | S | A | 1.1594 | |
| 4 | C | A | 1.2520 | |
| 5 | L | A | 0.6464 | |
| 6 | F | A | 1.0117 | |
| 7 | R | A | -1.5681 | |
| 8 | G | A | -1.4524 | |
| 9 | A | A | -0.9830 | |
| 10 | R | A | -2.2191 | |
| 11 | C | A | 0.0000 | |
| 12 | R | A | -0.8168 | |
| 13 | V | A | 1.1249 | |
| 14 | Y | A | 1.5190 | |
| 15 | S | A | -0.1292 | |
| 16 | G | A | -0.8747 | |
| 17 | R | A | -1.4049 | |
| 18 | S | A | -0.3124 | |
| 19 | C | A | 0.3041 | |
| 20 | C | A | 0.0000 | |
| 21 | F | A | 1.7821 | |
| 22 | G | A | -0.4631 | |
| 23 | Y | A | -0.6765 | |
| 24 | Y | A | -0.1662 | |
| 25 | C | A | -1.4627 | |
| 26 | R | A | -3.0463 | |
| 27 | R | A | -2.5705 | |
| 28 | D | A | -1.9667 | |
| 29 | F | A | 0.3341 | |
| 30 | P | A | -0.0398 | |
| 31 | G | A | -0.1286 | |
| 32 | S | A | 0.1615 | |
| 33 | I | A | 1.7533 | |
| 34 | F | A | 0.0830 | |
| 35 | G | A | -1.7354 | |
| 36 | T | A | -2.0094 | |
| 37 | C | A | 0.0000 | |
| 38 | S | A | -2.1147 | |
| 39 | R | A | -2.8082 | |
| 40 | R | A | -2.5467 | |
| 41 | N | A | -1.7614 | |
| 42 | F | A | 0.5750 |