Project name: 71899359533edad

Status: done

Started: 2025-06-03 05:03:07
Settings
Chain sequence(s) H: EVQLVQSGAEVKKPGATVKISCKASGFSIKDDYIHWVQQAPGKGLEWMGWIDAMNDDSQYSSKFQGRVTITVDTSTNTAYMKLSSLRSEDTAVYYCTYAFGGYWGQGTTVTVSS
L: DIVMTQTPLSLSVTPGQPASISCRSSQSLVHSDSNTYLHWYLQKPGQSPQLLIYLVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYFCGQSTHVPYAFGGGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:42)
Show buried residues

Minimal score value
-2.8975
Maximal score value
1.8496
Average score
-0.5982
Total score value
-135.1863

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0172
2 V H -1.0210
3 Q H -1.2067
4 L H 0.0000
5 V H 0.7583
6 Q H 0.0000
7 S H -0.4093
8 G H -0.5391
9 A H 0.0095
11 E H 0.0739
12 V H 0.9527
13 K H -0.8177
14 K H -2.0770
15 P H -2.0556
16 G H -1.4182
17 A H -1.1313
18 T H -1.1044
19 V H 0.0000
20 K H -1.6869
21 I H 0.0000
22 S H -0.2571
23 C H 0.0000
24 K H -0.3324
25 A H 0.0000
26 S H -0.7744
27 G H -1.1423
28 F H -0.8622
29 S H -0.8656
30 I H 0.0000
35 K H -1.5935
36 D H -1.9299
37 D H -0.6664
38 Y H -0.1016
39 I H 0.0000
40 H H 0.1489
41 W H 0.0000
42 V H 0.0000
43 Q H 0.0000
44 Q H -0.8400
45 A H -1.2267
46 P H -1.1730
47 G H -1.4559
48 K H -2.2885
49 G H -1.3843
50 L H 0.0000
51 E H -1.1671
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 W H 0.0000
56 I H 0.0000
57 D H -1.4600
58 A H 0.0000
59 M H -0.8213
62 N H -1.9295
63 D H -2.3092
64 D H -2.5973
65 S H -1.5566
66 Q H -1.1078
67 Y H -0.8299
68 S H 0.0000
69 S H -1.3908
70 K H -1.7673
71 F H 0.0000
72 Q H -1.9158
74 G H -1.3362
75 R H -1.0766
76 V H 0.0000
77 T H -0.6375
78 I H 0.0000
79 T H -0.3989
80 V H -0.5459
81 D H -0.6793
82 T H -0.5341
83 S H -0.4271
84 T H -0.4862
85 N H -0.7313
86 T H 0.0000
87 A H 0.0000
88 Y H -0.2434
89 M H 0.0000
90 K H -0.9661
91 L H 0.0000
92 S H -0.8472
93 S H -1.0194
94 L H 0.0000
95 R H -2.5054
96 S H -2.1249
97 E H -2.3954
98 D H 0.0000
99 T H -0.7955
100 A H 0.0000
101 V H 0.1439
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 T H 0.0000
106 Y H 0.0000
107 A H 0.7126
108 F H 1.8496
115 G H 0.0000
116 G H 0.7060
117 Y H 0.4750
118 W H -0.1180
119 G H 0.0000
120 Q H -1.2111
121 G H -0.5230
122 T H 0.0000
123 T H 0.0260
124 V H 0.0000
125 T H -0.2609
126 V H 0.0000
127 S H -1.0779
128 S H -0.8064
1 D L -1.4671
2 I L 0.0000
3 V L 0.7582
4 M L 0.0000
5 T L -0.3249
6 Q L 0.0000
7 T L -0.0115
8 P L 0.3740
9 L L 1.1564
10 S L 0.0790
11 L L -0.2517
12 S L -0.9417
13 V L 0.0000
14 T L -1.6064
15 P L -1.7927
16 G L -2.0208
17 Q L -2.3490
18 P L -1.9131
19 A L 0.0000
20 S L -0.6909
21 I L 0.0000
22 S L -0.7824
23 C L 0.0000
24 R L -2.2242
25 S L 0.0000
26 S L -0.9837
27 Q L -1.5143
28 S L -0.7990
29 L L 0.0000
30 V L 0.5764
31 H L -0.6233
32 S L -1.0869
34 D L -2.0329
35 S L -1.0887
36 N L -0.7818
37 T L 0.0836
38 Y L 0.6291
39 L L 0.0000
40 H L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 L L 0.0000
44 Q L -0.8881
45 K L -1.3197
46 P L -0.9372
47 G L -1.4216
48 Q L -2.0396
49 S L -1.2771
50 P L 0.0000
51 Q L -0.9355
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.3940
56 L L 0.4307
57 V L -0.1765
65 S L -0.6187
66 N L -1.0497
67 R L -1.5798
68 F L -0.3976
69 S L -0.5708
70 G L -0.7941
71 V L -0.9521
72 P L -1.2044
74 D L -2.3077
75 R L -1.9263
76 F L 0.0000
77 S L -1.2764
78 G L 0.0000
79 S L -0.6317
80 G L -0.9387
83 S L -0.6390
84 G L -0.6610
85 T L -1.4110
86 D L -1.9779
87 F L 0.0000
88 T L -0.9333
89 L L 0.0000
90 K L -1.4423
91 I L 0.0000
92 S L -2.0596
93 R L -2.8975
94 V L 0.0000
95 E L -2.6349
96 A L -1.4900
97 E L -1.9873
98 D L 0.0000
99 V L -0.7727
100 G L 0.0000
101 V L -0.0818
102 Y L 0.0000
103 F L 0.0000
104 C L 0.0000
105 G L 0.0000
106 Q L 0.0000
107 S L 0.3370
108 T L 0.0000
109 H L -0.3997
114 V L 0.1669
115 P L -0.3618
116 Y L -0.0111
117 A L 0.0866
118 F L 0.2506
119 G L 0.0000
120 G L -0.3939
121 G L 0.0000
122 T L 0.0000
123 K L -0.6212
124 V L 0.0000
125 E L -1.2847
126 I L -1.0024
127 K L -1.7933
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Laboratory of Theory of Biopolymers 2018