Project name: 1B2W

Status: done

Started: 2026-03-30 04:25:54
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Chain sequence(s) H: QVQLVQSGGGVVQPGRSLKLSCLASGYIFTSSWINWVKQRPGRGLEWIGRIDPSDGEVHYNQDFKDRFTISRDKSKNTLYLQMNSLRPEDTAVYYCARGFLPWFADWGQGTLVTVSS
L: DIQMTQSPSTLSASVGDRVTITCKASENVDTYVSWYQQKPGKAPKLLIYGASNRYTGVPSRFSGSGSGTDFTLTISSLQPDDFATYYCGQSYNYPFTFGQGTKVEVK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:24)
Show buried residues

Minimal score value
-2.9964
Maximal score value
2.3384
Average score
-0.5801
Total score value
-129.9368

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4114
2 V H -0.6699
3 Q H -1.1126
4 L H 0.0000
5 V H 0.4148
6 Q H 0.0000
7 S H -0.2375
8 G H -0.6487
9 G H 0.1759
11 G H 0.8554
12 V H 1.7558
13 V H 0.0287
14 Q H -1.1438
15 P H -1.5688
16 G H -1.9628
17 R H -2.5192
18 S H -1.7358
19 L H -0.9643
20 K H -1.3560
21 L H 0.0000
22 S H -0.0899
23 C H 0.0000
24 L H 0.4826
25 A H 0.0000
26 S H -0.1251
27 G H -0.4899
28 Y H 0.6231
29 I H 1.9038
30 F H 0.0000
35 T H -0.1132
36 S H 0.5448
37 S H 0.9549
38 W H 0.5036
39 I H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -0.8038
45 R H -1.4716
46 P H -1.2313
47 G H -1.6462
48 R H -2.6311
49 G H -1.6428
50 L H 0.0000
51 E H -0.8233
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 R H -0.3692
56 I H 0.0000
57 D H -1.1321
58 P H 0.0000
59 S H -1.5052
62 D H -2.2735
63 G H -1.7779
64 E H -1.6588
65 V H -0.5988
66 H H -0.6294
67 Y H -0.9796
68 N H -1.7649
69 Q H -2.6981
70 D H -2.5386
71 F H 0.0000
72 K H -2.8647
74 D H -2.9964
75 R H -1.9990
76 F H 0.0000
77 T H -0.7904
78 I H 0.0000
79 S H -0.4119
80 R H -0.9037
81 D H -1.5981
82 K H -2.0493
83 S H -1.7864
84 K H -2.3664
85 N H -1.4104
86 T H -0.7784
87 L H 0.0000
88 Y H -0.0464
89 L H 0.0000
90 Q H -0.7817
91 M H 0.0000
92 N H -1.7024
93 S H -1.7067
94 L H 0.0000
95 R H -1.7809
96 P H -1.3295
97 E H -1.5078
98 D H 0.0000
99 T H -0.2203
100 A H 0.0000
101 V H 0.6469
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 G H 0.0000
108 F H 2.2671
109 L H 2.3384
113 P H 1.2660
114 W H 1.2545
115 F H 0.0000
116 A H 0.0000
117 D H -0.4427
118 W H -0.7130
119 G H 0.0000
120 Q H -1.5973
121 G H -0.4672
122 T H 0.3950
123 L H 1.5680
124 V H 0.0000
125 T H 0.5736
126 V H 0.0000
127 S H -0.3570
128 S H -0.3583
1 D L -2.5301
2 I L 0.0000
3 Q L -2.2118
4 M L 0.0000
5 T L -1.3138
6 Q L 0.0000
7 S L -0.5876
8 P L -0.4851
9 S L -0.8311
10 T L -0.8391
11 L L -0.3920
12 S L -0.5287
13 A L 0.0000
14 S L 0.0071
15 V L 0.7339
16 G L -0.4519
17 D L -1.2014
18 R L -2.1001
19 V L 0.0000
20 T L -0.5457
21 I L 0.0000
22 T L -0.8313
23 C L 0.0000
24 K L -2.5692
25 A L 0.0000
26 S L -2.0726
27 E L -2.3943
28 N L -2.1641
29 V L 0.0000
36 D L -1.4260
37 T L -0.5238
38 Y L 0.4895
39 V L 0.0000
40 S L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.6926
46 P L -1.2118
47 G L -1.6170
48 K L -2.5703
49 A L -1.6233
50 P L 0.0000
51 K L -1.4524
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.0931
56 G L -0.2705
57 A L 0.0000
65 S L -0.8772
66 N L -1.3574
67 R L -1.5625
68 Y L -0.7853
69 T L -0.5101
70 G L -0.5884
71 V L -0.6042
72 P L -0.5399
74 S L -0.7026
75 R L -1.0278
76 F L 0.0000
77 S L -0.7862
78 G L 0.0000
79 S L -0.7956
80 G L -1.3589
83 S L -1.4858
84 G L -1.7577
85 T L -2.2553
86 D L -2.7700
87 F L 0.0000
88 T L -0.7927
89 L L 0.0000
90 T L -0.5985
91 I L 0.0000
92 S L -1.3408
93 S L -1.0866
94 L L 0.0000
95 Q L -0.9313
96 P L -0.7542
97 D L -1.8790
98 D L 0.0000
99 F L -0.3989
100 A L 0.0000
101 T L -0.9441
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 G L 0.0000
106 Q L 0.0000
107 S L 0.0000
108 Y L 0.0375
109 N L -1.0790
114 Y L -0.5111
115 P L -0.7320
116 F L 0.0000
117 T L -0.7213
118 F L -0.3458
119 G L 0.0000
120 Q L -1.6901
121 G L 0.0000
122 T L 0.0000
123 K L -1.6273
124 V L 0.0000
125 E L -0.6169
126 V L 0.7096
127 K L -0.8307
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Laboratory of Theory of Biopolymers 2018