| Chain sequence(s) |
A: SCVYIPCTVTALLGCSCSNRVCYNGIPCAE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:06)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.3684 | |
| 2 | C | A | 0.0000 | |
| 3 | V | A | 1.3197 | |
| 4 | Y | A | 2.4042 | |
| 5 | I | A | 2.5780 | |
| 6 | P | A | 0.9895 | |
| 7 | C | A | 0.0000 | |
| 8 | T | A | 0.9827 | |
| 9 | V | A | 1.5551 | |
| 10 | T | A | 1.2249 | |
| 11 | A | A | 1.2884 | |
| 12 | L | A | 2.4956 | |
| 13 | L | A | 2.2048 | |
| 14 | G | A | 0.6521 | |
| 15 | C | A | 0.0000 | |
| 16 | S | A | -0.0411 | |
| 17 | C | A | -0.4812 | |
| 18 | S | A | -1.1159 | |
| 19 | N | A | -1.7403 | |
| 20 | R | A | -1.4026 | |
| 21 | V | A | -0.9281 | |
| 22 | C | A | 0.0000 | |
| 23 | Y | A | 0.1477 | |
| 24 | N | A | -0.0978 | |
| 25 | G | A | 0.0699 | |
| 26 | I | A | 1.5420 | |
| 27 | P | A | 0.6441 | |
| 28 | C | A | 0.5188 | |
| 29 | A | A | -0.0527 | |
| 30 | E | A | -1.1856 |