| Chain sequence(s) |
A: FFKGHFF
C: FFKGHFF B: FFKGHFF E: FFKGHFF D: FFKGHFF G: FFKGHFF F: FFKGHFF I: FFKGHFF H: FFKGHFF K: FFKGHFF J: FFKGHFF M: FFKGHFF L: FFKGHFF O: FFKGHFF N: FFKGHFF Q: FFKGHFF P: FFKGHFF S: FFKGHFF R: FFKGHFF T: FFKGHFF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:10)
[INFO] Main: Simulation completed successfully. (00:07:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.8174 | |
| 2 | F | A | 0.0000 | |
| 3 | K | A | -0.7604 | |
| 4 | G | A | -0.4768 | |
| 5 | H | A | 0.4922 | |
| 6 | F | A | 2.5491 | |
| 7 | F | A | 3.5909 | |
| 1 | F | B | 0.6528 | |
| 2 | F | B | 0.0000 | |
| 3 | K | B | -0.9963 | |
| 4 | G | B | 0.0000 | |
| 5 | H | B | 0.0902 | |
| 6 | F | B | 1.9342 | |
| 7 | F | B | 2.8504 | |
| 1 | F | C | 0.8465 | |
| 2 | F | C | 0.0000 | |
| 3 | K | C | -0.9650 | |
| 4 | G | C | 0.0000 | |
| 5 | H | C | 0.1786 | |
| 6 | F | C | 1.8608 | |
| 7 | F | C | 3.3902 | |
| 1 | F | D | 0.7758 | |
| 2 | F | D | 0.0000 | |
| 3 | K | D | -0.9636 | |
| 4 | G | D | 0.0000 | |
| 5 | H | D | 0.4207 | |
| 6 | F | D | 2.4486 | |
| 7 | F | D | 3.2983 | |
| 1 | F | E | 0.7530 | |
| 2 | F | E | 0.0000 | |
| 3 | K | E | -1.0358 | |
| 4 | G | E | 0.0000 | |
| 5 | H | E | 0.4534 | |
| 6 | F | E | 2.3064 | |
| 7 | F | E | 3.3344 | |
| 1 | F | F | 1.7268 | |
| 2 | F | F | -0.0415 | |
| 3 | K | F | -1.5135 | |
| 4 | G | F | -0.5904 | |
| 5 | H | F | -0.0855 | |
| 6 | F | F | 2.5458 | |
| 7 | F | F | 3.0739 | |
| 1 | F | G | 1.9842 | |
| 2 | F | G | 0.3203 | |
| 3 | K | G | -1.4488 | |
| 4 | G | G | 0.0000 | |
| 5 | H | G | -0.5771 | |
| 6 | F | G | 1.7706 | |
| 7 | F | G | 2.8495 | |
| 1 | F | H | 0.0708 | |
| 2 | F | H | 0.0000 | |
| 3 | K | H | -1.2390 | |
| 4 | G | H | -0.3738 | |
| 5 | H | H | 0.5186 | |
| 6 | F | H | 2.4046 | |
| 7 | F | H | 3.2884 | |
| 1 | F | I | 0.8162 | |
| 2 | F | I | 0.0000 | |
| 3 | K | I | -1.3253 | |
| 4 | G | I | 0.0000 | |
| 5 | H | I | -0.3987 | |
| 6 | F | I | 2.1194 | |
| 7 | F | I | 3.2799 | |
| 1 | F | J | 0.8293 | |
| 2 | F | J | 0.0000 | |
| 3 | K | J | -1.0330 | |
| 4 | G | J | 0.0000 | |
| 5 | H | J | 0.1291 | |
| 6 | F | J | 2.1293 | |
| 7 | F | J | 3.3655 | |
| 1 | F | K | 0.3944 | |
| 2 | F | K | 0.0000 | |
| 3 | K | K | -1.0479 | |
| 4 | G | K | 0.0000 | |
| 5 | H | K | 0.1169 | |
| 6 | F | K | 2.1415 | |
| 7 | F | K | 3.2620 | |
| 1 | F | L | 0.5742 | |
| 2 | F | L | 0.0000 | |
| 3 | K | L | -0.9937 | |
| 4 | G | L | 0.0000 | |
| 5 | H | L | 0.5009 | |
| 6 | F | L | 2.4360 | |
| 7 | F | L | 3.2818 | |
| 1 | F | M | 0.6610 | |
| 2 | F | M | 0.0000 | |
| 3 | K | M | -1.1533 | |
| 4 | G | M | 0.0000 | |
| 5 | H | M | 0.3616 | |
| 6 | F | M | 2.3010 | |
| 7 | F | M | 3.3313 | |
| 1 | F | N | 0.9873 | |
| 2 | F | N | 0.0000 | |
| 3 | K | N | -0.9420 | |
| 4 | G | N | 0.0000 | |
| 5 | H | N | 0.1552 | |
| 6 | F | N | 2.0955 | |
| 7 | F | N | 3.2476 | |
| 1 | F | O | 1.0485 | |
| 2 | F | O | 0.0000 | |
| 3 | K | O | -0.6998 | |
| 4 | G | O | 0.0000 | |
| 5 | H | O | 0.5078 | |
| 6 | F | O | 2.1825 | |
| 7 | F | O | 3.3251 | |
| 1 | F | P | 1.0222 | |
| 2 | F | P | 0.0000 | |
| 3 | K | P | -0.8785 | |
| 4 | G | P | 0.0000 | |
| 5 | H | P | 0.4547 | |
| 6 | F | P | 2.1831 | |
| 7 | F | P | 2.9838 | |
| 1 | F | Q | 0.5148 | |
| 2 | F | Q | 0.0000 | |
| 3 | K | Q | -0.9013 | |
| 4 | G | Q | 0.0000 | |
| 5 | H | Q | 0.5708 | |
| 6 | F | Q | 2.2683 | |
| 7 | F | Q | 3.0635 | |
| 1 | F | R | 0.5008 | |
| 2 | F | R | 0.0000 | |
| 3 | K | R | -1.2310 | |
| 4 | G | R | 0.0000 | |
| 5 | H | R | 0.2487 | |
| 6 | F | R | 1.9173 | |
| 7 | F | R | 2.9413 | |
| 1 | F | S | 2.3400 | |
| 2 | F | S | 0.9942 | |
| 3 | K | S | -0.9222 | |
| 4 | G | S | -0.9201 | |
| 5 | H | S | -0.4404 | |
| 6 | F | S | 1.8855 | |
| 7 | F | S | 2.9375 | |
| 1 | F | T | 1.8559 | |
| 2 | F | T | 0.0089 | |
| 3 | K | T | -1.6799 | |
| 4 | G | T | -0.8934 | |
| 5 | H | T | -0.0729 | |
| 6 | F | T | 2.5916 | |
| 7 | F | T | 3.0867 |