| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVDGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPVHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAAPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPDGHPLPDAPPPSPLYKPPPASSPYAVRPSYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPLPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9435 | |
| 2 | L | A | 1.9633 | |
| 3 | P | A | 0.8448 | |
| 4 | P | A | 0.3868 | |
| 5 | T | A | 0.1298 | |
| 6 | T | A | 0.1279 | |
| 7 | P | A | 0.1880 | |
| 8 | V | A | 1.2089 | |
| 9 | A | A | 0.0910 | |
| 10 | K | A | -1.0219 | |
| 11 | V | A | -0.1645 | |
| 12 | Q | A | -1.4033 | |
| 13 | S | A | -1.5451 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4004 | |
| 16 | E | A | -2.4301 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4638 | |
| 20 | P | A | 0.1320 | |
| 21 | T | A | 0.1606 | |
| 22 | S | A | -0.0936 | |
| 23 | L | A | 0.0977 | |
| 24 | F | A | -0.0333 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2697 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8777 | |
| 31 | R | A | -2.6603 | |
| 32 | L | A | -0.7812 | |
| 33 | L | A | 1.1691 | |
| 34 | T | A | 1.3637 | |
| 35 | V | A | 1.8155 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2598 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6233 | |
| 40 | K | A | -1.8551 | |
| 41 | D | A | -0.7085 | |
| 42 | I | A | 1.2792 | |
| 43 | V | A | 2.1482 | |
| 44 | V | A | 1.5071 | |
| 45 | D | A | -1.0017 | |
| 46 | G | A | -0.5824 | |
| 47 | K | A | -0.2579 | |
| 48 | V | A | 2.1548 | |
| 49 | L | A | 2.4883 | |
| 50 | V | A | 1.4498 | |
| 51 | P | A | 0.3313 | |
| 52 | K | A | -0.6934 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1339 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3709 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2563 | |
| 70 | K | A | -1.7748 | |
| 71 | F | A | -0.6390 | |
| 72 | A | A | -0.5790 | |
| 73 | L | A | -0.8726 | |
| 74 | P | A | -1.2156 | |
| 75 | Q | A | -2.5120 | |
| 76 | K | A | -3.1144 | |
| 77 | D | A | -2.9939 | |
| 78 | F | A | -1.6736 | |
| 79 | Y | A | -1.8965 | |
| 80 | D | A | -2.6921 | |
| 81 | P | A | -2.3073 | |
| 82 | E | A | -3.0538 | |
| 83 | K | A | -3.3988 | |
| 84 | E | A | -2.4623 | |
| 85 | R | A | -1.2969 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6779 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9574 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3322 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6859 | |
| 99 | G | A | -0.5389 | |
| 100 | P | A | -0.4009 | |
| 101 | L | A | 0.0504 | |
| 102 | G | A | -0.1863 | |
| 103 | K | A | -0.5701 | |
| 104 | G | A | -0.4148 | |
| 105 | T | A | -0.4298 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1419 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4129 | |
| 110 | L | A | 0.3474 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0499 | |
| 113 | K | A | -0.4261 | |
| 114 | L | A | -1.0426 | |
| 115 | G | A | -1.0657 | |
| 116 | D | A | -1.4214 | |
| 117 | T | A | -0.8127 | |
| 118 | E | A | -1.7946 | |
| 119 | N | A | -2.2191 | |
| 120 | P | A | -1.8815 | |
| 121 | T | A | -1.5682 | |
| 122 | E | A | -2.2319 | |
| 123 | P | A | -0.9475 | |
| 124 | V | A | -0.8812 | |
| 125 | H | A | -1.3576 | |
| 126 | E | A | -1.9676 | |
| 127 | G | A | -1.9194 | |
| 128 | A | A | -1.4641 | |
| 129 | D | A | -2.3857 | |
| 130 | D | A | -1.9634 | |
| 131 | R | A | -1.0856 | |
| 132 | V | A | 0.2475 | |
| 133 | A | A | 0.4473 | |
| 134 | F | A | 0.2798 | |
| 135 | S | A | -0.0751 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.4512 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2307 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5632 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2084 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1120 | |
| 157 | D | A | 0.4866 | |
| 158 | I | A | 1.2482 | |
| 159 | A | A | 1.0045 | |
| 160 | A | A | 0.3573 | |
| 161 | P | A | 0.5952 | |
| 162 | C | A | 0.5857 | |
| 163 | P | A | 0.0556 | |
| 164 | G | A | -0.0677 | |
| 165 | L | A | 0.6263 | |
| 166 | P | A | -0.0890 | |
| 167 | P | A | -0.3275 | |
| 168 | G | A | -0.4140 | |
| 169 | A | A | -0.0107 | |
| 170 | C | A | 0.7372 | |
| 171 | P | A | 0.8110 | |
| 172 | P | A | 1.1208 | |
| 173 | I | A | 2.3193 | |
| 174 | Q | A | 1.1202 | |
| 175 | L | A | 1.4493 | |
| 176 | V | A | 0.8281 | |
| 177 | N | A | -0.3059 | |
| 178 | S | A | 0.0283 | |
| 179 | V | A | 0.4372 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3797 | |
| 182 | D | A | 0.0854 | |
| 183 | G | A | -0.1597 | |
| 184 | D | A | -0.5313 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0974 | |
| 190 | F | A | 0.0630 | |
| 191 | G | A | -0.1052 | |
| 192 | N | A | -0.2606 | |
| 193 | M | A | -0.1274 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3829 | |
| 197 | E | A | -2.6259 | |
| 198 | L | A | -1.2212 | |
| 199 | Q | A | -2.5460 | |
| 200 | Q | A | -3.3138 | |
| 201 | D | A | -3.5784 | |
| 202 | R | A | -3.3246 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1836 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3424 | |
| 211 | S | A | -1.8629 | |
| 212 | T | A | -1.4207 | |
| 213 | R | A | -2.0631 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1572 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3395 | |
| 220 | L | A | 0.5989 | |
| 221 | K | A | -1.1234 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8177 | |
| 224 | N | A | -1.4995 | |
| 225 | E | A | -1.2409 | |
| 226 | A | A | -0.5996 | |
| 227 | Y | A | -0.3583 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6573 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0897 | |
| 234 | F | A | 0.2752 | |
| 235 | G | A | -0.8139 | |
| 236 | R | A | -2.5949 | |
| 237 | R | A | -2.8776 | |
| 238 | E | A | -2.1226 | |
| 239 | Q | A | -0.2274 | |
| 240 | V | A | 1.3821 | |
| 241 | Y | A | 1.1019 | |
| 242 | A | A | 0.2372 | |
| 243 | R | A | -0.8837 | |
| 244 | H | A | -0.9282 | |
| 245 | F | A | 0.0365 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.3712 | |
| 249 | C | A | -1.0470 | |
| 250 | G | A | -0.9169 | |
| 251 | P | A | -1.0433 | |
| 252 | D | A | -1.2611 | |
| 253 | G | A | -1.2281 | |
| 254 | H | A | -1.3637 | |
| 255 | P | A | -1.1455 | |
| 256 | L | A | -0.2934 | |
| 257 | P | A | -0.8283 | |
| 258 | D | A | -1.8747 | |
| 259 | A | A | -1.1264 | |
| 260 | P | A | -1.1632 | |
| 261 | P | A | -1.0397 | |
| 262 | P | A | -0.6803 | |
| 263 | S | A | -0.6021 | |
| 264 | P | A | 0.1511 | |
| 265 | L | A | 1.1793 | |
| 266 | Y | A | -0.1795 | |
| 267 | K | A | -1.5883 | |
| 268 | P | A | -1.0716 | |
| 269 | P | A | -0.3013 | |
| 270 | P | A | -0.4071 | |
| 271 | A | A | 0.1909 | |
| 272 | S | A | 0.0437 | |
| 273 | S | A | 0.3951 | |
| 274 | P | A | 0.3318 | |
| 275 | Y | A | 1.3959 | |
| 276 | A | A | 1.0902 | |
| 277 | V | A | 1.5064 | |
| 278 | R | A | 0.3128 | |
| 279 | P | A | -0.1778 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.0056 | |
| 282 | D | A | -0.3437 | |
| 283 | Y | A | 1.1013 | |
| 284 | F | A | 0.8002 | |
| 285 | G | A | 0.2494 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9081 | |
| 291 | L | A | 1.6094 | |
| 292 | V | A | 0.6291 | |
| 293 | S | A | -0.1588 | |
| 294 | S | A | -0.9609 | |
| 295 | D | A | -1.8423 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1159 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6472 | |
| 301 | R | A | -1.8621 | |
| 302 | P | A | -0.9592 | |
| 303 | F | A | -0.1996 | |
| 304 | W | A | -0.5726 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0912 | |
| 307 | R | A | -2.8323 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2460 | |
| 310 | G | A | -1.2158 | |
| 311 | N | A | -1.2605 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7997 | |
| 319 | N | A | -0.8391 | |
| 320 | E | A | -1.0328 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3328 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0753 | |
| 333 | N | A | 0.5361 | |
| 334 | F | A | 1.7147 | |
| 335 | T | A | 0.7448 | |
| 336 | I | A | 0.4594 | |
| 337 | S | A | -0.9321 | |
| 338 | Q | A | -1.7068 | |
| 339 | Q | A | -1.1728 | |
| 340 | L | A | 0.6891 | |
| 341 | C | A | 0.5432 | |
| 342 | T | A | 0.3612 | |
| 343 | P | A | 0.1147 | |
| 344 | L | A | 0.9426 | |
| 345 | P | A | 0.4622 | |
| 346 | N | A | -0.0552 | |
| 347 | V | A | 1.6744 | |
| 348 | Y | A | 1.5659 | |
| 349 | D | A | 0.2091 | |
| 350 | P | A | -0.3810 | |
| 351 | S | A | -0.3322 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7097 | |
| 354 | K | A | -1.7934 | |
| 355 | N | A | -1.7592 | |
| 356 | Y | A | -0.0834 | |
| 357 | L | A | 0.6350 | |
| 358 | R | A | 0.9539 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3738 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0658 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9784 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6763 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3045 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3155 | |
| 376 | L | A | -1.7142 | |
| 377 | D | A | -1.9956 | |
| 378 | P | A | -1.0382 | |
| 379 | G | A | -1.0138 | |
| 380 | V | A | -0.9346 | |
| 381 | L | A | -0.5306 | |
| 382 | A | A | -0.6559 | |
| 383 | H | A | -0.8087 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4175 | |
| 386 | T | A | -0.5548 | |
| 387 | M | A | -0.2994 | |
| 388 | N | A | -0.8660 | |
| 389 | P | A | -1.2442 | |
| 390 | T | A | -1.4344 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4294 | |
| 393 | E | A | -2.7851 | |
| 394 | N | A | -2.1467 | |
| 395 | W | A | -1.3478 | |
| 396 | N | A | -1.1034 | |
| 397 | L | A | -0.2197 | |
| 398 | G | A | 0.5071 | |
| 399 | F | A | 2.4179 | |
| 400 | V | A | 1.8420 | |
| 401 | P | A | -0.1327 | |
| 402 | P | A | -1.8091 | |
| 403 | K | A | -3.2344 | |
| 404 | E | A | -3.7741 | |
| 405 | R | A | -3.8999 | |
| 406 | E | A | -3.7911 | |
| 407 | D | A | -2.8762 | |
| 408 | P | A | -1.7664 | |
| 409 | Y | A | -0.9878 | |
| 410 | K | A | -2.1198 | |
| 411 | G | A | -0.6347 | |
| 412 | L | A | 0.6794 | |
| 413 | I | A | 1.5929 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3869 | |
| 416 | E | A | -1.6785 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9371 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0296 | |
| 421 | E | A | -2.7574 | |
| 422 | R | A | -2.5852 | |
| 423 | F | A | -1.2959 | |
| 424 | S | A | -1.4594 | |
| 425 | Q | A | -1.8434 | |
| 426 | D | A | -2.9003 | |
| 427 | L | A | -2.0011 | |
| 428 | D | A | -2.7842 | |
| 429 | Q | A | -2.6253 | |
| 430 | F | A | -1.4552 | |
| 431 | A | A | -0.9297 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6589 | |
| 435 | K | A | -0.7586 | |
| 436 | F | A | 0.1084 | |
| 437 | L | A | 1.0026 | |
| 438 | Y | A | 0.8018 | |
| 439 | Q | A | -0.2927 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine