| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTIGHPLFNKLGDTENPTEPLHCGADDRVNFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPEGVPLPSAPPPSPLYVPPPPSSPYAVLPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPENNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9523 | |
| 2 | L | A | 1.9802 | |
| 3 | P | A | 0.8263 | |
| 4 | P | A | 0.3475 | |
| 5 | T | A | 0.0864 | |
| 6 | T | A | 0.1117 | |
| 7 | P | A | 0.1294 | |
| 8 | V | A | 1.1709 | |
| 9 | A | A | 0.0233 | |
| 10 | K | A | -1.1423 | |
| 11 | V | A | -0.3952 | |
| 12 | Q | A | -1.5233 | |
| 13 | S | A | -1.6011 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4209 | |
| 16 | E | A | -2.4388 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4587 | |
| 20 | P | A | 0.1054 | |
| 21 | T | A | 0.1133 | |
| 22 | S | A | -0.1692 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1059 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2614 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8714 | |
| 31 | R | A | -2.6459 | |
| 32 | L | A | -0.7711 | |
| 33 | L | A | 1.1971 | |
| 34 | T | A | 1.4116 | |
| 35 | V | A | 1.9133 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2279 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6157 | |
| 40 | K | A | -1.6362 | |
| 41 | D | A | -0.9214 | |
| 42 | I | A | 0.8049 | |
| 43 | V | A | 1.0016 | |
| 44 | K | A | -1.1925 | |
| 45 | N | A | -1.9288 | |
| 46 | G | A | -1.2364 | |
| 47 | K | A | -0.9489 | |
| 48 | V | A | 1.4909 | |
| 49 | V | A | 2.0619 | |
| 50 | V | A | 1.2913 | |
| 51 | P | A | 0.4745 | |
| 52 | K | A | -0.6237 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1514 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4906 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2712 | |
| 70 | K | A | -1.8200 | |
| 71 | F | A | -0.6776 | |
| 72 | A | A | -0.5754 | |
| 73 | L | A | -0.8638 | |
| 74 | P | A | -1.2651 | |
| 75 | Q | A | -2.4773 | |
| 76 | K | A | -3.0915 | |
| 77 | D | A | -2.9867 | |
| 78 | F | A | -1.6459 | |
| 79 | Y | A | -1.9134 | |
| 80 | D | A | -2.7469 | |
| 81 | P | A | -2.3385 | |
| 82 | E | A | -3.0599 | |
| 83 | K | A | -3.4364 | |
| 84 | E | A | -2.4977 | |
| 85 | R | A | -1.3063 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6494 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9727 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3266 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6776 | |
| 99 | G | A | -0.5430 | |
| 100 | P | A | -0.4250 | |
| 101 | L | A | -0.0047 | |
| 102 | G | A | -0.1976 | |
| 103 | K | A | -0.5756 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4225 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | -0.1049 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1963 | |
| 110 | L | A | -0.3821 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.3186 | |
| 113 | K | A | -0.4651 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.6282 | |
| 117 | T | A | -1.2593 | |
| 118 | E | A | -2.5570 | |
| 119 | N | A | -2.6307 | |
| 120 | P | A | -2.0995 | |
| 121 | T | A | -1.6342 | |
| 122 | E | A | -2.1969 | |
| 123 | P | A | -0.8709 | |
| 124 | L | A | -0.4973 | |
| 125 | H | A | -0.5116 | |
| 126 | C | A | -0.8821 | |
| 127 | G | A | -1.2651 | |
| 128 | A | A | -1.2808 | |
| 129 | D | A | -2.1972 | |
| 130 | D | A | -1.8144 | |
| 131 | R | A | -1.4809 | |
| 132 | V | A | -0.5399 | |
| 133 | N | A | -0.9184 | |
| 134 | F | A | -0.3935 | |
| 135 | S | A | -0.3638 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6866 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2076 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5669 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2263 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1926 | |
| 157 | D | A | 0.3988 | |
| 158 | L | A | 0.8896 | |
| 159 | A | A | 0.2119 | |
| 160 | E | A | -1.4322 | |
| 161 | P | A | -0.2191 | |
| 162 | C | A | 0.1769 | |
| 163 | P | A | -0.1745 | |
| 164 | G | A | -0.0845 | |
| 165 | L | A | 0.5761 | |
| 166 | P | A | -0.1226 | |
| 167 | P | A | -0.3452 | |
| 168 | G | A | -0.4267 | |
| 169 | A | A | 0.2803 | |
| 170 | C | A | 1.0059 | |
| 171 | P | A | 0.5402 | |
| 172 | P | A | 0.7140 | |
| 173 | I | A | 2.0432 | |
| 174 | Q | A | 0.8844 | |
| 175 | L | A | 1.5016 | |
| 176 | V | A | 0.8464 | |
| 177 | N | A | -0.3478 | |
| 178 | S | A | 0.0020 | |
| 179 | V | A | 0.3882 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3698 | |
| 182 | D | A | 0.0777 | |
| 183 | G | A | -0.1556 | |
| 184 | D | A | -0.5298 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1240 | |
| 190 | F | A | 0.0508 | |
| 191 | G | A | -0.1127 | |
| 192 | N | A | -0.2489 | |
| 193 | M | A | -0.0837 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3710 | |
| 197 | E | A | -2.5513 | |
| 198 | L | A | -1.1885 | |
| 199 | Q | A | -2.5397 | |
| 200 | Q | A | -3.3388 | |
| 201 | D | A | -3.5143 | |
| 202 | R | A | -3.3453 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1993 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3740 | |
| 211 | S | A | -1.9016 | |
| 212 | T | A | -1.4219 | |
| 213 | R | A | -2.0124 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1587 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2920 | |
| 220 | L | A | 0.5018 | |
| 221 | K | A | -1.3133 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9661 | |
| 224 | N | A | -1.6940 | |
| 225 | E | A | -1.3136 | |
| 226 | A | A | -0.6690 | |
| 227 | Y | A | -0.4561 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7141 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1386 | |
| 234 | F | A | -0.0004 | |
| 235 | G | A | -0.9373 | |
| 236 | R | A | -2.7132 | |
| 237 | R | A | -3.0447 | |
| 238 | E | A | -2.1831 | |
| 239 | Q | A | -0.2122 | |
| 240 | V | A | 1.3335 | |
| 241 | Y | A | 1.2143 | |
| 242 | A | A | 0.1344 | |
| 243 | R | A | -1.2002 | |
| 244 | H | A | -1.2368 | |
| 245 | F | A | -0.2859 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6199 | |
| 249 | C | A | -0.9237 | |
| 250 | G | A | -0.9467 | |
| 251 | P | A | -0.4964 | |
| 252 | E | A | -0.3613 | |
| 253 | G | A | 0.0755 | |
| 254 | V | A | 1.3011 | |
| 255 | P | A | 0.3895 | |
| 256 | L | A | 0.8432 | |
| 257 | P | A | 0.2874 | |
| 258 | S | A | -0.1076 | |
| 259 | A | A | 0.1677 | |
| 260 | P | A | -0.3503 | |
| 261 | P | A | -0.1969 | |
| 262 | P | A | 0.0735 | |
| 263 | S | A | 0.5138 | |
| 264 | P | A | 0.6787 | |
| 265 | L | A | 1.8752 | |
| 266 | Y | A | 1.7186 | |
| 267 | V | A | 1.9278 | |
| 268 | P | A | 0.9174 | |
| 269 | P | A | 0.6121 | |
| 270 | P | A | -0.1917 | |
| 271 | P | A | -0.1704 | |
| 272 | S | A | -0.3461 | |
| 273 | S | A | 0.1582 | |
| 274 | P | A | 0.2204 | |
| 275 | Y | A | 1.4114 | |
| 276 | A | A | 1.2079 | |
| 277 | V | A | 2.1500 | |
| 278 | L | A | 1.5175 | |
| 279 | P | A | 0.5309 | |
| 280 | P | A | 0.0657 | |
| 281 | T | A | -0.0499 | |
| 282 | D | A | -0.7091 | |
| 283 | Y | A | 0.7873 | |
| 284 | F | A | 0.6659 | |
| 285 | G | A | 0.0213 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9000 | |
| 291 | L | A | 1.4795 | |
| 292 | V | A | 0.6477 | |
| 293 | S | A | -0.1662 | |
| 294 | S | A | -1.0041 | |
| 295 | D | A | -1.8730 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0742 | |
| 298 | L | A | -1.2082 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6747 | |
| 301 | R | A | -1.9251 | |
| 302 | P | A | -0.9853 | |
| 303 | F | A | -0.2430 | |
| 304 | W | A | -0.5322 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0820 | |
| 307 | R | A | -2.9235 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7806 | |
| 310 | G | A | -1.4204 | |
| 311 | N | A | -1.3866 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9512 | |
| 319 | N | A | -0.9081 | |
| 320 | E | A | -1.0663 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3311 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0993 | |
| 333 | N | A | 0.4887 | |
| 334 | F | A | 1.5619 | |
| 335 | T | A | 0.7910 | |
| 336 | I | A | 0.4026 | |
| 337 | S | A | -1.0028 | |
| 338 | Q | A | -1.7679 | |
| 339 | Q | A | -1.3217 | |
| 340 | L | A | 0.6436 | |
| 341 | C | A | 0.2622 | |
| 342 | T | A | -0.3105 | |
| 343 | P | A | -0.8875 | |
| 344 | E | A | -2.2555 | |
| 345 | N | A | -2.0536 | |
| 346 | N | A | -1.4192 | |
| 347 | V | A | 0.6244 | |
| 348 | Y | A | 0.9723 | |
| 349 | D | A | -0.2088 | |
| 350 | P | A | -0.4184 | |
| 351 | S | A | -0.3359 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.8189 | |
| 354 | K | A | -1.8321 | |
| 355 | N | A | -1.7899 | |
| 356 | Y | A | -0.1016 | |
| 357 | L | A | 0.6110 | |
| 358 | R | A | 0.9412 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4229 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0115 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9364 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6656 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2843 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3304 | |
| 376 | L | A | -1.7594 | |
| 377 | D | A | -2.0489 | |
| 378 | P | A | -1.0710 | |
| 379 | G | A | -1.0261 | |
| 380 | V | A | -0.9356 | |
| 381 | L | A | -0.5493 | |
| 382 | A | A | -0.6644 | |
| 383 | H | A | -0.8469 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4078 | |
| 386 | T | A | -0.5720 | |
| 387 | M | A | -0.3336 | |
| 388 | N | A | -0.8688 | |
| 389 | P | A | -1.2804 | |
| 390 | T | A | -1.5778 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5444 | |
| 393 | E | A | -2.9554 | |
| 394 | N | A | -2.7336 | |
| 395 | W | A | -1.5330 | |
| 396 | N | A | -1.1741 | |
| 397 | L | A | -0.1929 | |
| 398 | G | A | 0.5467 | |
| 399 | F | A | 2.4265 | |
| 400 | V | A | 1.8609 | |
| 401 | P | A | 0.0629 | |
| 402 | P | A | -1.9676 | |
| 403 | K | A | -3.5020 | |
| 404 | E | A | -4.0166 | |
| 405 | R | A | -4.4644 | |
| 406 | E | A | -4.0208 | |
| 407 | D | A | -2.9749 | |
| 408 | P | A | -1.8212 | |
| 409 | Y | A | -0.9861 | |
| 410 | K | A | -2.0982 | |
| 411 | G | A | -0.6366 | |
| 412 | L | A | 0.6624 | |
| 413 | I | A | 1.5745 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4123 | |
| 416 | E | A | -1.7060 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9416 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0586 | |
| 421 | E | A | -2.7693 | |
| 422 | R | A | -2.5387 | |
| 423 | F | A | -1.2867 | |
| 424 | S | A | -1.4661 | |
| 425 | Q | A | -1.7981 | |
| 426 | D | A | -2.9021 | |
| 427 | L | A | -2.0083 | |
| 428 | D | A | -2.7823 | |
| 429 | Q | A | -2.6193 | |
| 430 | F | A | -1.4575 | |
| 431 | A | A | -0.9275 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6412 | |
| 435 | K | A | -0.7725 | |
| 436 | F | A | 0.1223 | |
| 437 | L | A | 1.0115 | |
| 438 | Y | A | 0.8092 | |
| 439 | Q | A | -0.2826 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine