Project name: query_structure

Status: done

Started: 2026-03-17 00:28:38
Settings
Chain sequence(s) A: FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYYMSVNIGSFFSMIATPWLAAKYGWSVAFALSVVGLLITIVNFAFCQRWVKQYGSKPDFEPINYRNLLLTIIGVVALIAIATWLLHNQEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGLAVEPEQYQALNPFWIIIGSPILAAIYNKMGDTLPMPTKFAIGMVMCSGAFLILPLGAKFASDAGIVSVSWLVASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGANLIGGYVAGMMAVPDNVTDPLMSLEVYGRVFLQIGVATAVIAVLMLLTAPKLHRMTQD
H: QVQLQESGGGLVQAGGSLRLSCAGSGRTFSSYNMGWFRQAPGKEREFVGGISWTGRSADYPDSVKGRFTISRDNAKNAVYLQMNSLKPEDTAVYYCAAKQYGSRADYPWDDYDYWGQGTQVTVSS
input PDB
Selected Chain(s) A,H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:08:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:08:48)
Show buried residues

Minimal score value
-3.5956
Maximal score value
3.6282
Average score
-0.0926
Total score value
-55.26

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
17 F A 1.1103
18 K A -0.9632
19 Q A 0.0000
20 P A -0.8639
21 K A -1.8028
22 A A 0.0000
23 F A 0.0000
24 Y A 0.1313
25 L A 0.0000
26 I A 0.0000
27 F A 0.9532
28 S A 0.4905
29 I A 0.0000
30 E A 0.0000
31 L A 0.8140
32 W A 1.0480
33 E A 0.0000
34 R A 0.1848
35 F A 1.0439
36 G A 0.0000
37 Y A 0.0000
38 Y A 0.4818
39 G A 0.0000
40 L A 0.0000
41 Q A -0.0571
42 G A 0.0000
43 I A 0.0000
44 M A 0.0000
45 A A 0.0000
46 V A 0.0000
47 Y A 0.0000
48 L A 0.0000
49 V A 0.0000
50 K A 0.0000
51 Q A -0.5637
52 L A -0.4509
53 G A -0.6282
54 M A -0.6524
55 S A -1.1934
56 E A 0.0000
57 A A -0.6668
58 D A -1.8476
59 S A 0.0000
60 I A 0.0000
61 T A -0.4193
62 L A 0.0000
63 F A 0.0000
64 S A 0.0000
65 S A 0.0000
66 F A 0.0000
67 S A 0.2082
68 A A 0.0000
69 L A 0.5838
70 V A 0.0000
71 Y A 0.7827
72 G A 0.7080
73 L A 0.4817
74 V A 0.0000
75 A A 0.4203
76 I A 0.5246
77 G A 0.0000
78 G A -0.4819
79 W A -0.0321
80 L A 0.0000
81 G A 0.0000
82 D A -2.4229
83 K A -2.3695
84 V A -0.9181
85 L A 0.0000
86 G A 0.0000
87 T A 0.0000
88 K A -0.7194
89 R A -0.2386
90 V A 0.0000
91 I A 0.0000
92 M A 0.5044
93 L A 0.6202
94 G A 0.0000
95 A A 0.0000
96 I A 1.9687
97 V A 0.0000
98 L A 0.0000
99 A A 0.0000
100 I A 2.3955
101 G A 0.0000
102 Y A 0.0000
103 A A 1.3733
104 L A 1.3541
105 V A 0.0000
106 A A 0.0000
107 W A 1.2276
108 S A -0.0036
109 G A -0.7158
110 H A -1.3673
111 D A -1.9524
112 A A -0.9748
113 G A -0.5207
114 I A 0.1377
115 V A 0.0000
116 Y A 0.0000
117 M A 0.5745
118 G A 0.0000
119 M A 0.0000
120 A A 0.0000
121 A A 0.0000
122 I A 0.0000
123 A A 0.0000
124 V A 0.0000
125 G A 0.0000
126 N A 0.0000
127 G A 0.0000
128 L A 0.0000
129 F A 0.0000
130 K A -1.1234
131 A A -0.6507
132 N A 0.0000
133 P A 0.0000
134 S A -0.1690
135 S A -0.5793
136 L A 0.0000
137 L A 0.0000
138 S A -0.8661
139 T A -0.7356
140 C A -0.8292
141 Y A 0.0000
142 E A -3.3258
143 K A -3.4418
144 N A -3.0243
145 D A -2.7942
146 P A -2.4793
147 R A -2.7464
148 L A -2.2845
149 D A -2.3563
150 G A -1.7646
151 A A 0.0000
152 F A -0.0507
153 T A 0.1414
154 M A 0.8477
155 Y A 0.0000
156 Y A 1.7341
157 M A 1.3096
158 S A 0.0000
159 V A 1.1468
160 N A 1.2588
161 I A 1.5170
162 G A 0.0000
163 S A 0.0000
164 F A 1.8686
165 F A 2.3656
166 S A 0.0000
167 M A 0.0000
168 I A 1.5933
169 A A 1.1865
170 T A 0.0000
171 P A 0.0000
172 W A 0.8443
173 L A 0.8301
174 A A 0.0000
175 A A 0.0000
176 K A -0.5312
177 Y A 1.0221
178 G A 0.0000
179 W A 0.0000
180 S A 0.8026
181 V A 1.3952
182 A A 0.0000
183 F A 0.0000
184 A A 1.0384
185 L A 1.0765
186 S A 0.0000
187 V A 0.0000
188 V A 2.1144
189 G A 0.0000
190 L A 0.0000
191 L A 2.8891
192 I A 1.9227
193 T A 0.0000
194 I A 2.1233
195 V A 2.1456
196 N A 1.1047
197 F A 0.0000
198 A A 0.8604
199 F A 1.6737
200 C A -0.2239
201 Q A -1.8796
202 R A -2.7342
203 W A -1.4318
204 V A 0.0000
205 K A -2.7413
206 Q A -1.8840
207 Y A -0.6764
208 G A 0.0000
209 S A -1.5447
210 K A -2.0735
211 P A -1.5497
212 D A 0.0000
213 F A 0.2352
214 E A -1.0855
215 P A -0.1470
216 I A 0.5132
217 N A -0.7718
218 Y A 0.4671
219 R A -0.8900
220 N A 0.1152
221 L A 1.0678
222 L A 1.6203
223 L A 2.3094
224 T A 0.0000
225 I A 2.5540
226 I A 3.5459
227 G A 2.1265
228 V A 0.0000
229 V A 3.1193
230 A A 2.0475
231 L A 1.8583
232 I A 1.9785
233 A A 1.8204
234 I A 2.3708
235 A A 0.0000
236 T A 1.0841
237 W A 1.3415
238 L A 0.6089
239 L A 0.0000
240 H A -1.0997
241 N A -1.2201
242 Q A -1.1222
243 E A -1.7048
244 V A -0.3272
245 A A -0.1548
246 R A -0.1045
247 M A 1.0810
248 A A 1.1233
249 L A 1.4553
250 G A 1.6851
251 V A 2.9907
252 V A 2.9693
253 A A 2.6510
254 F A 3.6282
255 G A 2.7323
256 I A 2.4261
257 V A 2.7268
258 V A 2.3815
259 I A 1.6857
260 F A 0.0000
261 G A 0.7957
262 K A -0.3587
263 E A -0.1862
264 A A 0.0000
265 F A 0.7972
266 A A -0.0516
267 M A -0.9953
268 K A -2.0450
269 G A -1.9280
270 A A -2.2603
271 A A -1.5674
272 R A -1.8661
273 R A -2.7919
274 K A -1.9199
275 M A 0.0000
276 I A 0.1975
277 V A 0.0000
278 A A 0.0000
279 F A 1.2287
280 I A 1.2176
281 L A 0.0000
282 M A 0.0000
283 L A 1.3305
284 E A 0.0000
285 A A 0.0000
286 I A 1.2354
287 I A 1.2835
288 F A 0.0000
289 F A 0.9380
290 V A 1.1736
291 L A 0.0000
292 Y A 0.3899
293 S A 0.4814
294 Q A 0.0000
295 M A 0.0000
296 P A -0.0106
297 T A 0.0000
298 S A 0.0000
299 L A 0.0000
300 N A 0.0000
301 F A 0.0000
302 F A 0.0000
303 A A 0.0000
304 I A 0.0000
305 R A 0.0000
306 N A 0.0000
307 V A 0.0000
308 E A -0.8687
309 H A 0.0000
310 S A 0.7368
311 I A 1.4603
312 L A 2.0141
313 G A 1.0485
314 L A 1.6811
315 A A 0.7902
316 V A 0.8127
317 E A 0.0000
318 P A 0.0000
319 E A 0.0000
320 Q A 0.5092
321 Y A 0.0000
322 Q A 0.0000
323 A A 0.0000
324 L A 0.0000
325 N A 0.3405
326 P A 0.0000
327 F A 1.4064
328 W A 1.2510
329 I A 0.0000
330 I A 1.5258
331 I A 1.8749
332 G A 1.6323
333 S A 1.3175
334 P A 1.3303
335 I A 2.5890
336 L A 1.7168
337 A A 0.6631
338 A A 0.6662
339 I A 0.7956
340 Y A -0.3276
341 N A -1.7688
342 K A -1.9297
343 M A -0.9416
344 G A -1.6350
345 D A -1.9632
346 T A -1.0190
347 L A -0.1765
348 P A -0.3665
349 M A 0.1031
350 P A 0.0000
351 T A 0.3238
352 K A 0.3978
353 F A 0.0000
354 A A 0.0000
355 I A 1.3380
356 G A 0.0000
357 M A 0.0000
358 V A 1.7607
359 M A 0.9909
360 C A 0.0000
361 S A 0.0000
362 G A 0.7605
363 A A 0.0000
364 F A 0.0000
365 L A 1.0092
366 I A 0.9224
367 L A 0.0000
368 P A -0.0601
369 L A 0.9341
370 G A 0.0000
371 A A -0.3157
372 K A -0.5443
373 F A 1.0134
374 A A 0.2515
375 S A -0.6907
376 D A -1.4399
377 A A -1.0729
378 G A 0.0000
379 I A 0.0750
380 V A 0.0000
381 S A 0.2099
382 V A 0.2836
383 S A 0.0657
384 W A 0.4049
385 L A 0.0000
386 V A 0.4825
387 A A 0.3829
388 S A 0.0000
389 Y A 0.0000
390 G A 0.0000
391 L A 0.8326
392 Q A 0.0000
393 S A 0.0000
394 I A 1.1299
395 G A 0.0000
396 E A 0.0559
397 L A 0.2721
398 M A 0.3841
399 I A 0.2097
400 S A -0.0882
401 G A -0.1192
402 L A 0.0000
403 G A 0.0354
404 L A 0.2695
405 A A -0.0112
406 M A -0.1577
407 V A 0.0000
408 A A -0.5171
409 Q A -1.2678
410 L A 0.0000
411 V A 0.0000
412 P A -1.3212
413 Q A -2.1751
414 R A -2.2808
415 L A -0.9241
416 M A -0.6964
417 G A -0.5388
418 F A 0.1684
419 I A 0.0000
420 M A 0.4207
421 G A 0.1581
422 S A 0.0000
423 W A 0.0000
424 F A 0.6984
425 L A 0.9794
426 T A 0.7202
427 T A 0.0000
428 A A 0.0000
429 G A 0.6112
430 A A 0.0000
431 N A 0.0000
432 L A 1.0138
433 I A 1.8718
434 G A 0.0000
435 G A 0.0000
436 Y A 1.9757
437 V A 1.3967
438 A A 0.0000
439 G A 0.5724
440 M A 1.0600
441 M A 0.0000
442 A A -0.1654
443 V A 0.0000
444 P A -1.1681
445 D A -1.9776
446 N A -1.3567
447 V A -0.9982
448 T A -1.0672
449 D A -1.3177
450 P A 0.0000
451 L A 0.0135
452 M A 0.0059
453 S A 0.0000
454 L A -0.5831
455 E A -1.2570
456 V A -0.2297
457 Y A 0.0000
458 G A -1.1300
459 R A -1.9587
460 V A -0.5872
461 F A 0.0000
462 L A 0.2054
463 Q A -0.7783
464 I A 0.0000
465 G A 0.0000
466 V A 1.3950
467 A A 0.9440
468 T A 0.0000
469 A A 1.9642
470 V A 3.0538
471 I A 2.7758
472 A A 0.0000
473 V A 3.4492
474 L A 3.2279
475 M A 0.0000
476 L A 2.5765
477 L A 2.4500
478 T A 0.8484
479 A A 0.0000
480 P A -1.0090
481 K A -2.1073
482 L A 0.0000
483 H A -2.1999
484 R A -3.5138
485 M A -2.6839
486 T A -2.4606
487 Q A -3.0067
488 D A -2.9232
1 Q H -1.4564
2 V H -1.0055
3 Q H -1.8008
4 L H 0.0000
5 Q H -1.7651
6 E H -1.4367
7 S H -1.1867
8 G H -1.1306
9 G H -0.7572
10 G H 0.0200
11 L H 1.0807
12 V H 0.0041
13 Q H -1.2561
14 A H -1.5666
15 G H -1.3082
16 G H -0.8974
17 S H -1.0117
18 L H -0.7224
19 R H -1.7301
20 L H 0.0000
21 S H -0.8445
22 C H 0.0000
23 A H -1.1934
24 G H -1.1724
25 S H -1.3060
26 G H -1.2944
27 R H -1.4198
28 T H -0.8768
29 F H 0.0000
30 S H -0.7200
31 S H -0.3702
32 Y H 0.0000
33 N H 0.0000
34 M H 0.0000
35 G H 0.0000
36 W H 0.0000
37 F H 0.0000
38 R H 0.0000
39 Q H -2.0956
40 A H -1.9827
41 P H -1.5259
42 G H -2.0148
43 K H -3.3672
44 E H -3.5956
45 R H -2.8395
46 E H -1.7299
47 F H -0.7272
48 V H 0.0000
49 G H 0.0000
50 G H 0.0000
51 I H 0.0000
52 S H 0.0000
53 W H 0.0000
54 T H 0.0000
55 G H -0.8179
56 R H 0.0000
57 S H -0.8283
58 A H 0.0000
59 D H -2.3812
60 Y H -1.9758
61 P H -1.9552
62 D H -2.8633
63 S H -1.8898
64 V H 0.0000
65 K H -3.0255
66 G H -1.8502
67 R H -1.6762
68 F H 0.0000
69 T H -0.7703
70 I H 0.0000
71 S H -0.4517
72 R H -0.6998
73 D H -1.1945
74 N H -1.2066
75 A H -1.1937
76 K H -2.0738
77 N H -1.5014
78 A H -1.1335
79 V H 0.0000
80 Y H -0.4897
81 L H 0.0000
82 Q H -1.0240
83 M H 0.0000
84 N H -1.2930
85 S H -1.2449
86 L H 0.0000
87 K H -2.2901
88 P H -1.8584
89 E H -2.3269
90 D H 0.0000
91 T H -0.8380
92 A H 0.0000
93 V H -0.5529
94 Y H 0.0000
95 Y H -0.3553
96 C H 0.0000
97 A H 0.0000
98 A H 0.0000
99 K H 0.0000
100 Q H -0.8273
101 Y H -0.4181
102 G H -0.1838
103 S H 0.0000
104 R H -0.5000
105 A H 0.0000
106 D H -1.0643
107 Y H 0.0000
108 P H -0.9352
109 W H -1.1995
110 D H -2.0088
111 D H -1.5925
112 Y H 0.0000
113 D H -1.2526
114 Y H -0.2550
115 W H -0.1758
116 G H -0.7654
117 Q H -1.4548
118 G H 0.0000
119 T H -1.0701
120 Q H -1.0282
121 V H 0.0000
122 T H -0.3335
123 V H 0.0000
124 S H -0.6735
125 S H -1.0761
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Laboratory of Theory of Biopolymers 2018