| Chain sequence(s) |
A: SLVEEELFREIDRYLEEKAVQLFLEWLKNGGPS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07)
[INFO] Main: Simulation completed successfully. (00:01:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | 0.1457 | |
| 2 | L | A | 1.3007 | |
| 3 | V | A | 1.1674 | |
| 4 | E | A | -0.7132 | |
| 5 | E | A | -1.2901 | |
| 6 | E | A | -1.7737 | |
| 7 | L | A | -0.3808 | |
| 8 | F | A | -0.1438 | |
| 9 | R | A | -2.6140 | |
| 10 | E | A | -2.6640 | |
| 11 | I | A | -0.7385 | |
| 12 | D | A | -2.7466 | |
| 13 | R | A | -3.2031 | |
| 14 | Y | A | -1.0745 | |
| 15 | L | A | -1.1848 | |
| 16 | E | A | -2.8686 | |
| 17 | E | A | -2.5466 | |
| 18 | K | A | -1.5063 | |
| 19 | A | A | -0.3604 | |
| 20 | V | A | 0.2653 | |
| 21 | Q | A | -0.2865 | |
| 22 | L | A | 1.1493 | |
| 23 | F | A | 1.9001 | |
| 24 | L | A | 0.8125 | |
| 25 | E | A | -0.9362 | |
| 26 | W | A | 0.3082 | |
| 27 | L | A | -0.1057 | |
| 28 | K | A | -1.9391 | |
| 29 | N | A | -2.0889 | |
| 30 | G | A | -1.5611 | |
| 31 | G | A | -0.5430 | |
| 32 | P | A | -0.3931 | |
| 33 | S | A | -0.4479 |